CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

im:7142702 *(Danio rerio)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSDARG00000067727	T090995_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
BCL11B M04453_2.00	Homo sapiens	GTGAACGBNDNNVCTACAC	GTGTAGBNNHNVCGTTCAC	SELEX Yin et al.(2017) BCL11B_eDBD_HT-SELEX	0.823	0.956
BCL11B M04454_2.00	Homo sapiens	GTGAACGBNDNHVCTACAC	GTGTAGBDNHNVCGTTCAC	SELEX Yin et al.(2017) BCL11B_eDBD_Methyl-HT-SELEX	0.823	0.956
BCL11A M07926_2.00	Homo sapiens	BTYTCASTTCCYYHH	DDRRGGAASTGARAV	ChIP-seq Gerstein et al.(2012) GM12878_BCL11A_HudsonAlpha	0.804	0.921
BCL11A M08881_2.00	Homo sapiens	BHBYCABTTCCYBHNYN	NRNDVRGGAAVTGRVDV	Misc Kulakovskiy et al.(2013) BC11A_HUMAN.H11MO.0.A	0.804	0.921
BCL11A M10187_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$BCL11A_02	0.804	0.921
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Links
Other C2H2 ZF family TFs
Other *Danio rerio* TFs