CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ikzf2
(
Dipodomys ordii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDORG00000007539
T092774_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IKZF2
M10105_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HELIOSA_01
0.827
1.000
IKZF2
M10106_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HELIOSA_02
0.827
1.000
Ikzf1
M08969_2.00
Mus musculus
HYTCCCAV
BTGGGARD
Misc
Kulakovskiy et al.(2013)
IKZF1_MOUSE.H11MO.0.C
0.804
0.924
IKZF1
M08939_2.00
Homo sapiens
HYTCCCAV
BTGGGARD
Misc
Kulakovskiy et al.(2013)
IKZF1_HUMAN.H11MO.0.C
0.804
0.913
IKZF1
M10301_2.00
Homo sapiens
NHBYGGGAAYRYB
VRYRTTCCCRVDN
Transfac
Matys et al.(2006)
V$IK1_01
0.804
0.913
IKZF1
M10302_2.00
Homo sapiens
BNNWTCCCRNNN
NNNYGGGAWNNV
Transfac
Matys et al.(2006)
V$IK2_01
0.804
0.913
IKZF1
M10303_2.00
Homo sapiens
KNYHGGGAAYRYY
RRYRTTCCCDRNM
Transfac
Matys et al.(2006)
V$IK3_01
0.804
0.913
IKZF1
M10304_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IK_Q5_01
0.804
0.913
IKZF1
M10305_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IK_Q5
0.804
0.913
IKZF1
M10306_2.00
Homo sapiens
YYTCCCARA
TYTGGGARR
Transfac
Matys et al.(2006)
V$LYF1_01
0.804
0.913
IKZF3
M08320_2.00
Homo sapiens
TTCCCNNSB
VSNNGGGAA
ChIP-seq
Schmitges et al.(2016)
Q9UKT9_2-4.RCADE
0.776
0.837
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000007073
C2H2 ZF
100
122
LKCDVCGMVCIGPNVLMVHKRSH
ENSDORP00000007073
C2H2 ZF
128
150
FHCNQCGASFTQKGNLLRHIKLH
ENSDORP00000007073
C2H2 ZF
156
178
FKCPFCSYACRRRDALTGHLRTH
ENSDORP00000007073
C2H2 ZF
184
207
HKCNYCGRSYKQRSSLEEHKERCH
Links
Other
C2H2 ZF
family TFs
Other
Dipodomys ordii
TFs
207 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_07294
Colletotrichum fioriniae
CFIO01_07294
N
0.000
Cob_01730
Colletotrichum orbiculare
Cob_01730
N
0.000
CSUB01_10562
Colletotrichum sublineola
CSUB01_10562
N
0.000
F503_06966
Ophiostoma piceae uamh
F503_06966
N
0.000
FFUJ_01501
Fusarium fujikuroi
FFUJ_01501
I
0.000
FGRRES_01307
Fusarium graminearum
FGRRES_01307
I
0.000
FOXG_00080
Fusarium oxysporum
FOXG_00080
I
0.000
FPSE_01403
Fusarium pseudograminearum
FPSE_01403
I
0.000
FVEG_01436
Fusarium verticillioides
FVEG_01436
I
0.000
GLRG_03872
Colletotrichum graminicola
GLRG_03872
N
0.000
HMPREF1624_02502
Sporothrix schenckii
HMPREF1624_02502
N
0.000
OCS_06442
Ophiocordyceps sinensis
OCS_06442
I
0.000
PDE_07053
Penicillium oxalicum
PDE_07053
I
0.000
PODANS_1_13720
Podospora anserina
PODANS_1_13720
N
0.000
SPBR_02720
Sporothrix brasiliensis
SPBR_02720
N
0.000
TRIREDRAFT_58130
Trichoderma reesei
TRIREDRAFT_58130
I
0.000
TRIVIDRAFT_173998
Trichoderma virens
TRIVIDRAFT_173998
I
0.000
VDAG_08823
Verticillium dahliae
VDAG_08823
N
0.000
VDBG_05122
Verticillium albo atrum
VDBG_05122
N
0.000
VDBG_05122
Verticillium alfalfae
VDBG_05122
N
0.000