Bcl11a (Dipodomys ordii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDORG00000010064 T092834_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.827 1.000
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.827 1.000
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.827 1.000
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.806 0.947
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000009461 C2H2 ZF 377 398
ENSDORP00000009461 C2H2 ZF 404 426
ENSDORP00000009461 C2H2 ZF 742 764
ENSDORP00000009461 C2H2 ZF 770 792
ENSDORP00000009461 C2H2 ZF 800 823

Links

Other C2H2 ZF family TFs
Other Dipodomys ordii TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R013848 Calypte anna Aan_R013848 I
Aan_R015566 Calypte anna Aan_R015566 I
Afo_R000157 Aptenodytes forsteri Afo_R000157 I
Afo_R010797 Aptenodytes forsteri Afo_R010797 I
Alligator_sinensis_CCG021121.1 Alligator sinensis Alligator_sinensis_CCG021121.1 I
Brh_R001745 Buceros rhinoceros Brh_R001745 I
Brh_R009468 Buceros rhinoceros Brh_R009468 I
Cmyd_10011034 Chelonia mydas Cmyd_10011034 I
Cmyd_10014086 Chelonia mydas Cmyd_10014086 I
BNC2 Anolis carolinensis ENSACAG00000017743 I
ENSAMEG00000012362 Ailuropoda melanoleuca ENSAMEG00000012362 I
ENSAMEG00000014505 Ailuropoda melanoleuca ENSAMEG00000014505 I
ENSAMXG00000015422 Astyanax mexicanus ENSAMXG00000015422 I
ENSAPLG00000005793 Anas platyrhynchos ENSAPLG00000005793 I
ENSAPLG00000008295 Anas platyrhynchos ENSAPLG00000008295 I
BNC1 Bos taurus ENSBTAG00000015462 I
BNC2 Canis familiaris ENSCAFG00000001562 I
BNC1 Canis familiaris ENSCAFG00000013219 I
BNC2 Choloepus hoffmanni ENSCHOG00000006932 I
BNC2 Callithrix jacchus ENSCJAG00000012578 I
BNC1 Callithrix jacchus ENSCJAG00000015761 I
BNC1 Cavia porcellus ENSCPOG00000009045 I
ENSCSAG00000009282 Chlorocebus sabaeus ENSCSAG00000009282 I
ENSCSAG00000017303 Chlorocebus sabaeus ENSCSAG00000017303 I
bnc2 Danio rerio ENSDARG00000069989 I
BNC1 Dasypus novemcinctus ENSDNOG00000010537 I
ENSDNOG00000040600 Dasypus novemcinctus ENSDNOG00000040600 I
Bnc1 Dipodomys ordii ENSDORG00000001268 I
Bnc2 Dipodomys ordii ENSDORG00000008840 I
BNC1 Equus caballus ENSECAG00000017409 I
BNC2 Equus caballus ENSECAG00000017503 I
BNC2 Erinaceus europaeus ENSEEUG00000002527 I
BNC1 Erinaceus europaeus ENSEEUG00000013292 I
BNC2 Echinops telfairi ENSETEG00000004420 I
BNC1 Echinops telfairi ENSETEG00000005529 I
ENSFALG00000003044 Ficedula albicollis ENSFALG00000003044 I
ENSFALG00000011147 Ficedula albicollis ENSFALG00000011147 I
BNC1 Felis catus ENSFCAG00000004847 I
BNC2 Felis catus ENSFCAG00000027700 I
BNC1 Homo sapiens ENSG00000169594 I
BNC2 Homo sapiens ENSG00000173068 I
bnc2 Gasterosteus aculeatus ENSGACG00000017398 I
BNC1 Gallus gallus ENSGALG00000006041 I
BNC2 Gallus gallus ENSGALG00000015101 I
BNC2 Gorilla gorilla ENSGGOG00000004532 I
BNC1 Gorilla gorilla ENSGGOG00000006610 I
ENSLACG00000017528 Latimeria chalumnae ENSLACG00000017528 I
BNC2 Loxodonta africana ENSLAFG00000000476 I
BNC1 Loxodonta africana ENSLAFG00000000536 I
ENSLOCG00000011896 Lepisosteus oculatus ENSLOCG00000011896 I
ENSLOCG00000012902 Lepisosteus oculatus ENSLOCG00000012902 I
ENSMEUG00000012369 Macropus eugenii ENSMEUG00000012369 I
ENSMEUG00000016184 Macropus eugenii ENSMEUG00000016184 I
BNC1 Meleagris gallopavo ENSMGAG00000007844 I
BNC1 Microcebus murinus ENSMICG00000015019 I
BNC2 Myotis lucifugus ENSMLUG00000004109 I
BNC1 Myotis lucifugus ENSMLUG00000014956 I
BNC2 Macaca mulatta ENSMMUG00000001141 I
BNC1 Macaca mulatta ENSMMUG00000008188 I
BNC2 Monodelphis domestica ENSMODG00000014900 I
BNC1 Monodelphis domestica ENSMODG00000019380 I
ENSMPUG00000004030 Mustela putorius furo ENSMPUG00000004030 I
ENSMPUG00000015509 Mustela putorius furo ENSMPUG00000015509 I
Bnc1 Mus musculus ENSMUSG00000025105 D
Bnc2 Mus musculus ENSMUSG00000028487 I
ENSNLEG00000010826 Nomascus leucogenys ENSNLEG00000010826 I
ENSNLEG00000017578 Nomascus leucogenys ENSNLEG00000017578 I
ENSOANG00000004079 Ornithorhynchus anatinus ENSOANG00000004079 I
BNC2 Ornithorhynchus anatinus ENSOANG00000012860 I
ENSOARG00000014059 Ovis aries ENSOARG00000014059 I
ENSOARG00000014185 Ovis aries ENSOARG00000014185 I
BNC1 Oryctolagus cuniculus ENSOCUG00000000136 I
BNC2 Oryctolagus cuniculus ENSOCUG00000004460 I
BNC2 Otolemur garnettii ENSOGAG00000001628 I
BNC1 Otolemur garnettii ENSOGAG00000012148 I
BNC2 Ochotona princeps ENSOPRG00000012145 I
BNC1 Ochotona princeps ENSOPRG00000012498 I
ENSP00000307041 Macaca fascicularis ENSP00000307041 I
ENSP00000307041-D1 Bos grunniens ENSP00000307041-D1 I
ENSP00000370047 Macaca fascicularis ENSP00000370047 I
ENSP00000370047-D1 Bos grunniens ENSP00000370047-D1 I
ENSPANG00000015607 Papio anubis ENSPANG00000015607 I
ENSPANG00000025234 Papio anubis ENSPANG00000025234 I
BNC2 Procavia capensis ENSPCAG00000000849 I
ENSPMAG00000002267 Petromyzon marinus ENSPMAG00000002267 I
ENSPPYG00000019203 Pongo abelii ENSPPYG00000019203 I
ENSPSIG00000007268 Pelodiscus sinensis ENSPSIG00000007268 I
ENSPSIG00000018240 Pelodiscus sinensis ENSPSIG00000018240 I
BNC1 Pan troglodytes ENSPTRG00000007392 I
BNC2 Pan troglodytes ENSPTRG00000020789 I
BNC1 Pteropus vampyrus ENSPVAG00000008256 I
BNC2 Pteropus vampyrus ENSPVAG00000015905 I
Bnc2 Rattus norvegicus ENSRNOG00000006553 I
Bnc1 Rattus norvegicus ENSRNOG00000019770 I
BNC2 Sorex araneus ENSSARG00000012472 I
ENSSHAG00000018273 Sarcophilus harrisii ENSSHAG00000018273 I
BNC1 Sus scrofa ENSSSCG00000001798 I
BNC2 Sus scrofa ENSSSCG00000005180 I
ENSSSCG00000025613 Sus scrofa ENSSSCG00000025613 I
ENSSTOG00000011561 Ictidomys tridecemlineatus ENSSTOG00000011561 I
ENSSTOG00000019904 Ictidomys tridecemlineatus ENSSTOG00000019904 I
BNC1 Tupaia belangeri ENSTBEG00000009591 I
BNC2 Taeniopygia guttata ENSTGUG00000004482 I
BNC1 Taeniopygia guttata ENSTGUG00000007753 I
ENSTSYG00000004934 Tarsius syrichta ENSTSYG00000004934 I
ENSTSYG00000007392 Tarsius syrichta ENSTSYG00000007392 I
BNC1 Tursiops truncatus ENSTTRG00000004952 I
BNC2 Tursiops truncatus ENSTTRG00000013676 I
BNC1 Vicugna pacos ENSVPAG00000004601 I
Gfo_R001923 Geospiza fortis Gfo_R001923 I
Gfo_R004238 Geospiza fortis Gfo_R004238 I
Myotis_brandtii_BNC1_10013186 Myotis brandtii Myotis_brandtii_BNC1_10013186 I
Myotis_brandtii_BNC2_10027298 Myotis brandtii Myotis_brandtii_BNC2_10027298 I
Ogr06244 Ophisaurus gracilis Ogr06244 I
Pvit_01426 Pogona vitticeps Pvit_01426 I
Pvit_13632 Pogona vitticeps Pvit_13632 I
Tal_R005923 Tyto alba Tal_R005923 I
Tal_R008092 Tyto alba Tal_R008092 I
bnc1 Xenopus tropicalis XB-GENE-1217655 I
bnc2 Xenopus tropicalis XB-GENE-953157 I