BCL6 (Echinops telfairi)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSETEG00000014830 T094039_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL6
M00228_2.00 		Homo sapiens
NNVNDVRANN
NNTYBHNBNN		 PBM
Barrera et al.(2016)
BCL6_REF 		0.817 0.985
BCL6
M04424_2.00 		Homo sapiens
NYGCTTTCKAGGAAHN
NDTTCCTMGAAAGCRN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_1 		0.817 0.985
BCL6
M04425_2.00 		Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_2 		0.817 0.985
Bcl6
M08097_2.00 		Mus musculus
NDCYYTCYAGGAAN
NTTCCTRGARRGHN		 ChIP-seq
Mathelier et al.(2014)
MA0463.1 		0.817 0.985
Bcl6
M08024_2.00 		Mus musculus
HYNBHHWBWSHTCHYNYYYYYYNBYYHYYH
DRRDRRVNRRRRRRNRDGADSWVWDDVNRD		 ChIP-seq
Chen et al.(2011)
SRP001843_Bcl6_IgG_LPSstim 		0.817 0.985
BCL6
M08877_2.00 		Homo sapiens
NNMYYTCYAGGAA
TTCCTRGARRKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_HUMAN.H11MO.0.A 		0.817 0.985
Bcl6
M08972_2.00 		Mus musculus
NNMTYTCYAGGAA
TTCCTRGARAKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_MOUSE.H11MO.0.A 		0.817 0.985
Bcl6
M09513_2.00 		Mus musculus
NNNNYTTCYWGGAAN
NTTCCWRGAARNNNN		 Misc
Heinz et al.(2010)
Liver-Bcl6_GSE31578 		0.817 0.985
BCL6
M10180_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_01 		0.817 0.985
BCL6
M10181_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_02 		0.817 0.985
BCL6
M10182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3_01 		0.817 0.985
BCL6
M10183_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3 		0.817 0.985
BCL6
M10184_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q6 		0.817 0.985
BCL6
M04426_2.00 		Homo sapiens
NTGCTTTCTAGGAAHN
NDTTCCTAGAAAGCAN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_1 		0.817 0.985
BCL6
M04427_2.00 		Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_2 		0.817 0.985
BCL6
M00227_2.00 		Homo sapiens
NTAATTRWNN
NNWYAATTAN		 PBM
Barrera et al.(2016)
BCL6_H676Y 		0.810 0.949
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000012020 C2H2 ZF 514 537
ENSETEP00000012020 C2H2 ZF 542 564
ENSETEP00000012020 C2H2 ZF 570 592
ENSETEP00000012020 C2H2 ZF 598 619
ENSETEP00000012020 C2H2 ZF 625 647
ENSETEP00000012020 C2H2 ZF 653 676

Links

Other C2H2 ZF family TFs
Other Echinops telfairi TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011167 Calypte anna Aan_R011167 I
Afo_R004922 Aptenodytes forsteri Afo_R004922 I
Brh_R009309 Buceros rhinoceros Brh_R009309 I
ENSAMEG00000002162 Ailuropoda melanoleuca ENSAMEG00000002162 I
ENSAPLG00000001239 Anas platyrhynchos ENSAPLG00000001239 I
PRDM15 Bos taurus ENSBTAG00000021253 I
PRDM15 Canis familiaris ENSCAFG00000010223 I
PRDM15 Callithrix jacchus ENSCJAG00000013815 I
PRDM15 Cavia porcellus ENSCPOG00000023446 I
ENSCSAG00000008213 Chlorocebus sabaeus ENSCSAG00000008213 I
ENSECAG00000017225 Equus caballus ENSECAG00000017225 I
ENSFALG00000002064 Ficedula albicollis ENSFALG00000002064 I
PRDM15 Felis catus ENSFCAG00000012695 I
PRDM15 Homo sapiens ENSG00000141956 D
PRDM15 Gallus gallus ENSGALG00000019178 I
PRDM15 Loxodonta africana ENSLAFG00000008866 I
PRDM15 Meleagris gallopavo ENSMGAG00000014568 I
PRDM15 Myotis lucifugus ENSMLUG00000001078 I
ENSMMUG00000018046 Macaca mulatta ENSMMUG00000018046 I
PRDM15 Monodelphis domestica ENSMODG00000020959 I
ENSMPUG00000008938 Mustela putorius furo ENSMPUG00000008938 I
Prdm15 Mus musculus ENSMUSG00000014039 I
ENSP00000269844 Macaca fascicularis ENSP00000269844 I
ENSPANG00000006262 Papio anubis ENSPANG00000006262 I
Prdm15 Rattus norvegicus ENSRNOG00000001620 I
ENSSHAG00000002844 Sarcophilus harrisii ENSSHAG00000002844 I
ENSSTOG00000000262 Ictidomys tridecemlineatus ENSSTOG00000000262 I
PRDM15 Taeniopygia guttata ENSTGUG00000005437 I
PRDM15 Tursiops truncatus ENSTTRG00000012632 I
Tal_R008593 Tyto alba Tal_R008593 I
prdm15 Xenopus tropicalis XB-GENE-1013930 I