ENSFALG00000007450 (Ficedula albicollis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSFALG00000007450 T094267_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PATZ1
M08287_2.00 		Homo sapiens
CCCCDCCC
GGGHGGGG		 ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME 		0.825 0.993
PATZ1
M08864_2.00 		Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN		 Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C 		0.825 0.993
PATZ1
M10137_2.00 		Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN		 Transfac
Matys et al.(2006)
V$MAZR_01 		0.825 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFALP00000007777 C2H2 ZF 190 212
ENSFALP00000007777 C2H2 ZF 254 275
ENSFALP00000007777 C2H2 ZF 281 303
ENSFALP00000007777 C2H2 ZF 311 334
ENSFALP00000007777 C2H2 ZF 340 362
ENSFALP00000007777 C2H2 ZF 394 416

Links

Other C2H2 ZF family TFs
Other Ficedula albicollis TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA000472 Oryza indica BGIOSGA000472 N
BGIOSGA017944 Oryza indica BGIOSGA017944 N
BRADI2G23710 Brachypodium distachyon BRADI2G23710 N
F775_29279 Aegilops tauschii F775_29279 N
GLYMA18G07250 Glycine max GLYMA18G07250 I
GRMZM2G056986 Zea mays GRMZM2G056986 N
GRMZM2G125522 Zea mays GRMZM2G125522 N
LPERR01G32290 Leersia perrieri LPERR01G32290 N
LPERR05G14660 Leersia perrieri LPERR05G14660 N
MLOC_70659 Hordeum vulgare MLOC_70659 N
OB01G46330 Oryza brachyantha OB01G46330 N
OB05G26340 Oryza brachyantha OB05G26340 N
OBART01G37590 Oryza barthii OBART01G37590 N
OBART01G37610 Oryza barthii OBART01G37610 N
OGLUM01G41520 Oryza glumaepatula OGLUM01G41520 N
OGLUM05G19710 Oryza glumaepatula OGLUM05G19710 N
OLONG_007151 Oryza longistaminata OLONG_007151 N
OMERI01G34580 Oryza meridionalis OMERI01G34580 N
OMERI05G16220 Oryza meridionalis OMERI05G16220 N
ONIVA01G42500 Oryza nivara ONIVA01G42500 N
ONIVA05G19570 Oryza nivara ONIVA05G19570 N
OPUNC01G36480 Oryza punctata OPUNC01G36480 N
OPUNC05G16320 Oryza punctata OPUNC05G16320 N
ORGLA01G0314400 Oryza glaberrima ORGLA01G0314400 N
ORGLA05G0161500 Oryza glaberrima ORGLA05G0161500 N
ORUFI01G40950 Oryza rufipogon ORUFI01G40950 N
ORUFI05G19800 Oryza rufipogon ORUFI05G19800 N
OS01G0853700 Oryza sativa OS01G0853700 N
OS05G0449900 Oryza sativa OS05G0449900 N
Pavir.J04337 Panicum virgatum Pavir.J04337 N
Pavir.J16113 Panicum virgatum Pavir.J16113 I
Sb03g040160 Sorghum bicolor Sb03g040160 N
Sb09g022060 Sorghum bicolor Sb09g022060 N
Si002423m.g Setaria italica Si002423m.g N
Si022816m.g Setaria italica Si022816m.g N
TRAES3BF018800030CFD_g Triticum aestivum TRAES3BF018800030CFD_g N