ENSFALG00000013342 (Ficedula albicollis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSFALG00000013342 T094344_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM4
M02881_2.00 		Homo sapiens
TTTCAAGGCCCCC
GGGGGCCTTGAAA		 SELEX
Jolma et al.(2013)
PRDM4_1 		0.821 0.971
PRDM4
M04421_2.00 		Homo sapiens
YRRCNGTTTCAAGKCYMCCC
GGGKRGMCTTGAAACNGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX 		0.821 0.971
PRDM4
M04422_2.00 		Homo sapiens
YRGCRGTTTCRAGGSTTVCC
GGBAASCCTYGAAACYGCYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1 		0.821 0.971
PRDM4
M04423_2.00 		Homo sapiens
YRRCRGTTTCRAGKSYNCCC
GGGNRSMCTYGAAACYGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2 		0.821 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFALP00000013921 C2H2 ZF 586 608
ENSFALP00000013921 C2H2 ZF 614 636
ENSFALP00000013921 C2H2 ZF 642 664
ENSFALP00000013921 C2H2 ZF 670 692
ENSFALP00000013921 C2H2 ZF 698 720
ENSFALP00000013921 C2H2 ZF 726 747

Links

Other C2H2 ZF family TFs
Other Ficedula albicollis TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_079170 Acremonium chrysogenum ACRE_079170 N 0.000
BBA_04448 Beauveria bassiana BBA_04448 N 0.000
NFIA_003270 Neosartorya fischeri CADNFIAG00000089 N 0.000
CFIO01_10935 Colletotrichum fioriniae CFIO01_10935 N 0.000
CH063_07408 Colletotrichum higginsianum CH063_07408 N 0.000
Cob_08103 Colletotrichum orbiculare Cob_08103 N 0.000
CSUB01_03837 Colletotrichum sublineola CSUB01_03837 N 0.000
FFUJ_01364 Fusarium fujikuroi FFUJ_01364 N 0.000
fgenesh1_pm.sca_1_chr1_3_0000112 Nectria haematococca fgenesh1_pm.sca_1_chr1_3_0000112 N 0.000
FGRRES_01172 Fusarium graminearum FGRRES_01172 N 0.000
FPSE_02603 Fusarium pseudograminearum FPSE_02603 N 0.000
FVEG_01299 Fusarium verticillioides FVEG_01299 N 0.000
GLRG_04054 Colletotrichum graminicola GLRG_04054 N 0.000
MAC_04201 Metarhizium acridum MAC_04201 N 0.000
MAJ_02155 Metarhizium majus MAJ_02155 N 0.000
MANI_024672 Metarhizium anisopliae MANI_024672 N 0.000
MBR_03632 Metarhizium brunneum MBR_03632 N 0.000
MGU_04822 Metarhizium guizhouense MGU_04822 N 0.000
NechaG89979 Fusarium solani NechaG89979 N 0.000
OCS_04252 Ophiocordyceps sinensis OCS_04252 N 0.000
S40285_00886 Stachybotrys chlorohalonata S40285_00886 N 0.000
S40288_08147 Stachybotrys chartarum S40288_08147 N 0.000
TRIATDRAFT_221642 Trichoderma atroviride TRIATDRAFT_221642 N 0.000
TRIREDRAFT_78895 Trichoderma reesei TRIREDRAFT_78895 N 0.000
TRIVIDRAFT_35417 Trichoderma virens TRIVIDRAFT_35417 N 0.000
UV8b_5696 Ustilaginoidea virens UV8b_5696 N 0.000
VHEMI06418 Torrubiella hemipterigena VHEMI06418 N 0.000
X797_003689 Metarhizium robertsii X797_003689 N 0.000