CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BCL6
(
Felis catus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSFCAG00000006810
T094440_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL6
M00228_2.00
Homo sapiens
NNVNDVRANN
NNTYBHNBNN
PBM
Barrera et al.(2016)
BCL6_REF
0.827
1.000
BCL6
M04424_2.00
Homo sapiens
NYGCTTTCKAGGAAHN
NDTTCCTMGAAAGCRN
SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_1
0.827
1.000
BCL6
M04425_2.00
Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN
SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_2
0.827
1.000
Bcl6
M08097_2.00
Mus musculus
NDCYYTCYAGGAAN
NTTCCTRGARRGHN
ChIP-seq
Mathelier et al.(2014)
MA0463.1
0.827
1.000
Bcl6
M08024_2.00
Mus musculus
HYNBHHWBWSHTCHYNYYYYYYNBYYHYYH
DRRDRRVNRRRRRRNRDGADSWVWDDVNRD
ChIP-seq
Chen et al.(2011)
SRP001843_Bcl6_IgG_LPSstim
0.827
1.000
BCL6
M08877_2.00
Homo sapiens
NNMYYTCYAGGAA
TTCCTRGARRKNN
Misc
Kulakovskiy et al.(2013)
BCL6_HUMAN.H11MO.0.A
0.827
1.000
Bcl6
M08972_2.00
Mus musculus
NNMTYTCYAGGAA
TTCCTRGARAKNN
Misc
Kulakovskiy et al.(2013)
BCL6_MOUSE.H11MO.0.A
0.827
1.000
Bcl6
M09513_2.00
Mus musculus
NNNNYTTCYWGGAAN
NTTCCWRGAARNNNN
Misc
Heinz et al.(2010)
Liver-Bcl6_GSE31578
0.827
1.000
BCL6
M10180_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL6_01
0.827
1.000
BCL6
M10181_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL6_02
0.827
1.000
BCL6
M10182_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL6_Q3_01
0.827
1.000
BCL6
M10183_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL6_Q3
0.827
1.000
BCL6
M10184_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL6_Q6
0.827
1.000
BCL6
M04426_2.00
Homo sapiens
NTGCTTTCTAGGAAHN
NDTTCCTAGAAAGCAN
SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_1
0.827
1.000
BCL6
M04427_2.00
Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN
SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_2
0.827
1.000
BCL6
M00227_2.00
Homo sapiens
NTAATTRWNN
NNWYAATTAN
PBM
Barrera et al.(2016)
BCL6_H676Y
0.821
0.964
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000006325
C2H2 ZF
518
541
FFCNECDCRFSEEASLKRHTLQTH
ENSFCAP00000006325
C2H2 ZF
546
568
YKCDRCQASFRYKGNLASHKTVH
ENSFCAP00000006325
C2H2 ZF
574
596
YRCNICGAQFNRPANLKTHTRIH
ENSFCAP00000006325
C2H2 ZF
602
624
YKCETCGARFVQVAHLRAHVLIH
ENSFCAP00000006325
C2H2 ZF
630
652
YPCEICGTRFRHLQTLKSHLRIH
ENSFCAP00000006325
C2H2 ZF
658
681
YHCEKCNLHFRHKSQLRLHLRQKH
Links
Other
C2H2 ZF
family TFs
Other
Felis catus
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL002769
Aedes aegypti
AAEL002769
N
AARA009757
Anopheles arabiensis
AARA009757
I
AATE019368
Anopheles atroparvus
AATE019368
N
ACHR007729
Anopheles christyi
ACHR007729
I
ACOC_0000703501
Angiostrongylus costaricensis
ACOC_0000703501
I
ACOM033416
Anopheles coluzzii
ACOM033416
N
ACUA003826
Anopheles culicifacies
ACUA003826
I
ACYPI001696
Acyrthosiphon pisum
ACYPI001696
I
AEPI001687
Anopheles epiroticus
AEPI001687
I
AFAF012033
Anopheles farauti
AFAF012033
N
AGAP004052
Anopheles gambiae
AGAP004052
N
AMEC020934
Anopheles melas
AMEC020934
N
AMEM000031
Anopheles merus
AMEM000031
N
AMIN002618
Anopheles minimus
AMIN002618
I
ANCCAN_23624
Ancylostoma caninum
ANCCAN_23624
I
ANCCAN_23625
Ancylostoma caninum
ANCCAN_23625
N
ANCCAN_24706
Ancylostoma caninum
ANCCAN_24706
I
ANCCEY_02877
Ancylostoma ceylanicum
ANCCEY_02877
I
ANCDUO_15205
Ancylostoma duodenale
ANCDUO_15205
I
ANCDUO_20174
Ancylostoma duodenale
ANCDUO_20174
I
ASIM_0001696801
Anisakis simplex
ASIM_0001696801
N
ASTEI07078
Anopheles stephensi
ASTEI07078
I
ASU_00242
Ascaris suum
ASU_00242
I
Bm5024
Brugia malayi
Bm5024
I
CapteG2449
Capitella teleta
CapteG2449
N
CBG22984
Caenorhabditis briggsae
CBG22984
I
CBN10125
Caenorhabditis brenneri
CBN10125
I
Cflo_00868--XP_392355.3_APIME
Camponotus floridanus
Cflo_00868--XP_392355.3_APIME
I
CGOC_0000822101
Cylicostephanus goldi
CGOC_0000822101
I
CJA12444
Caenorhabditis japonica
CJA12444
I
CRE23850
Caenorhabditis remanei
CRE23850
I
D917_07791
Trichinella nativa
D917_07791
I
D918_02805
Trichuris suis
D918_02805
I
DAPPUDRAFT_290533
Daphnia pulex
DAPPUDRAFT_290533
I
DICVIV_00921
Dictyocaulus viviparus
DICVIV_00921
I
DME_0000841401
Dracunculus medinensis
DME_0000841401
I
ECPE_0000538001
Echinostoma caproni
ECPE_0000538001
N
EFV53283
Trichinella spiralis
EFV53283
I
EVEC_0001110501
Enterobius vermicularis
EVEC_0001110501
I
pros
Drosophila melanogaster
FBgn0004595
N
pros
Drosophila simulans
FBgn0025030
N
pros
Drosophila virilis
FBgn0028753
N
GA14403
Drosophila pseudoobscura
FBgn0074431
N
GF16857
Drosophila ananassae
FBgn0093877
N
GG18089
Drosophila erecta
FBgn0110306
N
GH21437
Drosophila grimshawi
FBgn0128899
N
GI22696
Drosophila mojavensis
FBgn0145423
N
GM23939
Drosophila sechellia
FBgn0178804
N
GK11290
Drosophila willistoni
FBgn0213301
N
GE26090
Drosophila yakuba
FBgn0243130
N
Hba_13682
Heterorhabditis bacteriophora
Hba_13682
N
HCOI01824000
Haemonchus contortus
HCOI01824000
I
HCOI02128500
Haemonchus contortus
HCOI02128500
I
L596_g9976
Steinernema carpocapsae
L596_g9976
I
L889_g22574
Steinernema feltiae
L889_g22574
I
L892_g25141
Steinernema scapterisci
L892_g25141
I
L893_g28279
Steinernema glaseri
L893_g28279
I
L898_g8569
Steinernema monticolum
L898_g8569
I
LDEC004085
Leptinotarsa decemlineata
LDEC004085
N
LOAG_13494
Loa loa
LOAG_13494
N
MCOS_0000195601
Mesocestoides corti
MCOS_0000195601
I
nAv.1.0.1.g00051
Acanthocheilonema viteae
nAv.1.0.1.g00051
N
nAv.1.0.1.g04749
Acanthocheilonema viteae
nAv.1.0.1.g04749
I
nDi.2.2.2.g11480
Dirofilaria immitis
nDi.2.2.2.g11480
N
NECAME_07738
Necator americanus
NECAME_07738
I
nLs.2.1.2.g05095
Litomosoides sigmodontis
nLs.2.1.2.g05095
I
nOo.2.0.1.g10265
Onchocerca ochengi
nOo.2.0.1.g10265
I
PHUM334550
Pediculus humanus
PHUM334550
I
PPAI010076
Phlebotomus papatasi
PPAI010076
I
PTRK_0001568700
Parastrongyloides trichosuri
PTRK_0001568700
I
RSKR_0000081800
Rhabditophanes kr3021
RSKR_0000081800
N
SINV18378
Solenopsis invicta
SINV18378
I
SPAL_0001624500
Strongyloides papillosus
SPAL_0001624500
I
SSTP_0000359900
Strongyloides stercoralis
SSTP_0000359900
I
SVE_0442300
Strongyloides venezuelensis
SVE_0442300
I
SVUK_0000405601
Strongylus vulgaris
SVUK_0000405601
I
TC010596
Tribolium castaneum
TC010596
N
TELCIR_21732
Teladorsagia circumcincta
TELCIR_21732
I
TELCIR_22329
Teladorsagia circumcincta
TELCIR_22329
I
TMUE_s0183000500
Trichuris muris
TMUE_s0183000500
I
TTRE_0000134301
Trichuris trichiura
TTRE_0000134301
I
pros-1
Caenorhabditis elegans
WBGene00000448
D
WBGene00244521
Onchocerca volvulus
WBGene00244521
I
WUBG_10304
Wuchereria bancrofti
WUBG_10304
N
YQE_10516
Dendroctonus ponderosae
YQE_10516
I