BCL11B (Homo sapiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSG00000127152 T094903_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M00986_2.00		 Homo sapiens
BTHYGGMCV
BGKCCRDAV		 PBM
Liu et al.(2018)
BCL11B_23		 (Direct) (Direct)
BCL11B
M00987_2.00		 Homo sapiens
NNNTGWCCVN
NBGGWCANNN		 PBM
Liu et al.(2018)
BCL11B_456		 (Direct) (Direct)
BCL11B
M00988_2.00		 Homo sapiens
NNTGWCCVN
NBGGWCANN		 PBM
Liu et al.(2018)
BCL11B_XL		 (Direct) (Direct)
BCL11B
M04453_2.00		 Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX		 (Direct) (Direct)
BCL11B
M04454_2.00		 Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.806 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.806 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00986_2.00 C2H2 ZF 16 38
M00986_2.00 C2H2 ZF 44 68
M00987_2.00 C2H2 ZF 16 38
M00987_2.00 C2H2 ZF 44 66
M00987_2.00 C2H2 ZF 74 97
M00988_2.00 C2H2 ZF 149 172
M00988_2.00 C2H2 ZF 355 376
M00988_2.00 C2H2 ZF 382 404
M00988_2.00 C2H2 ZF 714 736
M00988_2.00 C2H2 ZF 742 764
M00988_2.00 C2H2 ZF 772 795

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000280435 C2H2 ZF 357 378
ENSP00000280435 C2H2 ZF 384 406
ENSP00000280435 C2H2 ZF 725 747
ENSP00000280435 C2H2 ZF 753 775
ENSP00000280435 C2H2 ZF 783 806
ENSP00000349723 C2H2 ZF 149 172
ENSP00000349723 C2H2 ZF 355 376
ENSP00000349723 C2H2 ZF 382 404
ENSP00000349723 C2H2 ZF 714 736
ENSP00000349723 C2H2 ZF 742 764
ENSP00000349723 C2H2 ZF 772 795
ENSP00000387419 C2H2 ZF 235 257
ENSP00000387419 C2H2 ZF 263 287
ENSP00000387419 C2H2 ZF 602 624
ENSP00000387419 C2H2 ZF 630 652
ENSP00000387419 C2H2 ZF 660 683

Links

Other C2H2 ZF family TFs
Other Homo sapiens TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CTRG_03159 Candida tropicalis CTRG_03159 I
GNLVRS01_PISO0F12061g Millerozyma farinosa GNLVRS01_PISO0F12061g N
PV08_07340 Exophiala spinifera PV08_07340 N