bcl11aa (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000013419 T095716_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.804 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.804 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.804 0.947
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.800 0.921
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.800 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000017735 C2H2 ZF 230 252
ENSGACP00000017735 C2H2 ZF 258 280
ENSGACP00000017735 C2H2 ZF 591 613
ENSGACP00000017735 C2H2 ZF 619 641
ENSGACP00000017735 C2H2 ZF 649 672

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R002718 Calypte anna Aan_R002718 I 0.000
Afo_R000376 Aptenodytes forsteri Afo_R000376 I 0.000
Alligator_sinensis_CCG007030.1 Alligator sinensis Alligator_sinensis_CCG007030.1 I 0.000
Alligator_sinensis_CCG016908.1 Alligator sinensis Alligator_sinensis_CCG016908.1 I 0.000
Brh_R005562 Buceros rhinoceros Brh_R005562 I 0.000
CapteG216503 Capitella teleta CapteG216503 I 0.000
ATF6 Anolis carolinensis ENSACAG00000001336 I 0.000
ATF6B Anolis carolinensis ENSACAG00000010535 I 0.000
ENSAMEG00000001631 Ailuropoda melanoleuca ENSAMEG00000001631 I 0.000
ENSAMEG00000002381 Ailuropoda melanoleuca ENSAMEG00000002381 I 0.000
ENSAMXG00000010343 Astyanax mexicanus ENSAMXG00000010343 I 0.000
ENSAPLG00000013950 Anas platyrhynchos ENSAPLG00000013950 I 0.000
ATF6 Bos taurus ENSBTAG00000005227 I 0.000
ATF6B Bos taurus ENSBTAG00000008794 I 0.000
ENSBTAP00000042742-D1 Bos grunniens ENSBTAP00000042742-D1 I 0.000
ATF6B Canis familiaris ENSCAFG00000000761 I 0.000
ATF6 Canis familiaris ENSCAFG00000013068 I 0.000
ATF6 Choloepus hoffmanni ENSCHOG00000009031 I 0.000
ATF6 Callithrix jacchus ENSCJAG00000004572 I 0.000
ATF6B Callithrix jacchus ENSCJAG00000036009 I 0.000
ATF6 Cavia porcellus ENSCPOG00000010325 I 0.000
ATF6B Cavia porcellus ENSCPOG00000023551 I 0.000
ENSCSAG00000002721 Chlorocebus sabaeus ENSCSAG00000002721 I 0.000
ENSCSAG00000009237 Chlorocebus sabaeus ENSCSAG00000009237 I 0.000
atf6 Danio rerio ENSDARG00000012656 I 0.000
ENSDNOG00000008226 Dasypus novemcinctus ENSDNOG00000008226 I 0.000
ATF6B Dasypus novemcinctus ENSDNOG00000042135 I 0.000
Atf6b Dipodomys ordii ENSDORG00000004227 I 0.000
ATF6B Equus caballus ENSECAG00000021507 I 0.000
ATF6 Equus caballus ENSECAG00000022307 I 0.000
ATF6 Erinaceus europaeus ENSEEUG00000000007 I 0.000
ATF6 Echinops telfairi ENSETEG00000004183 I 0.000
ENSFALG00000003490 Ficedula albicollis ENSFALG00000003490 I 0.000
ATF6B Felis catus ENSFCAG00000018408 I 0.000
ATF6 Felis catus ENSFCAG00000023651 I 0.000
ATF6 Homo sapiens ENSG00000118217 D 0.000
ATF6B Homo sapiens ENSG00000213676 D 0.000
atf6 Gasterosteus aculeatus ENSGACG00000011702 I 0.000
ENSGALG00000002658 Gallus gallus ENSGALG00000002658 I 0.000
ATF6B Gorilla gorilla ENSGGOG00000004870 I 0.000
ATF6 Gorilla gorilla ENSGGOG00000013807 I 0.000
ENSGMOG00000018033 Gadus morhua ENSGMOG00000018033 I 0.000
ENSLACG00000012831 Latimeria chalumnae ENSLACG00000012831 I 0.000
ATF6 Loxodonta africana ENSLAFG00000003622 I 0.000
ATF6B Loxodonta africana ENSLAFG00000020739 I 0.000
ENSLOCG00000001278 Lepisosteus oculatus ENSLOCG00000001278 I 0.000
ENSMEUG00000008122 Macropus eugenii ENSMEUG00000008122 I 0.000
ATF6 Meleagris gallopavo ENSMGAG00000005185 I 0.000
ATF6 Microcebus murinus ENSMICG00000000038 I 0.000
ATF6B Myotis lucifugus ENSMLUG00000026641 I 0.000
ATF6 Macaca mulatta ENSMMUG00000004049 I 0.000
ATF6B Macaca mulatta ENSMMUG00000015229 I 0.000
ATF6 Monodelphis domestica ENSMODG00000000980 I 0.000
ATF6B Monodelphis domestica ENSMODG00000014920 I 0.000
ENSMPUG00000003493 Mustela putorius furo ENSMPUG00000003493 I 0.000
ENSMPUG00000010305 Mustela putorius furo ENSMPUG00000010305 I 0.000
Atf6b Mus musculus ENSMUSG00000015461 I 0.000
Atf6 Mus musculus ENSMUSG00000026663 I 0.000
ENSNLEG00000006562 Nomascus leucogenys ENSNLEG00000006562 I 0.000
ENSNLEG00000014528 Nomascus leucogenys ENSNLEG00000014528 I 0.000
ATF6 Ornithorhynchus anatinus ENSOANG00000009735 I 0.000
ENSOARG00000010418 Ovis aries ENSOARG00000010418 I 0.000
ATF6 Oryctolagus cuniculus ENSOCUG00000007930 I 0.000
ATF6B Oryctolagus cuniculus ENSOCUG00000023089 I 0.000
ATF6 Otolemur garnettii ENSOGAG00000001917 I 0.000
ATF6B Otolemur garnettii ENSOGAG00000032721 I 0.000
ENSONIG00000002137 Oreochromis niloticus ENSONIG00000002137 I 0.000
ATF6B Ochotona princeps ENSOPRG00000019053 I 0.000
atf6 Oryzias latipes ENSORLG00000016676 I 0.000
ENSP00000356919 Macaca fascicularis ENSP00000356919 I 0.000
ENSP00000356919-D1 Bos grunniens ENSP00000356919-D1 I 0.000
ENSP00000364349 Macaca fascicularis ENSP00000364349 I 0.000
ENSPANG00000006897 Papio anubis ENSPANG00000006897 I 0.000
ENSPANG00000021910 Papio anubis ENSPANG00000021910 I 0.000
ATF6B Procavia capensis ENSPCAG00000009251 I 0.000
ENSPFOG00000018418 Poecilia formosa ENSPFOG00000018418 I 0.000
ENSPMAG00000007037 Petromyzon marinus ENSPMAG00000007037 I 0.000
ENSPPYG00000000589 Pongo abelii ENSPPYG00000000589 I 0.000
ENSPPYG00000016479 Pongo abelii ENSPPYG00000016479 I 0.000
ENSPSIG00000016522 Pelodiscus sinensis ENSPSIG00000016522 I 0.000
ATF6 Pan troglodytes ENSPTRG00000001596 I 0.000
ATF6B Pan troglodytes ENSPTRG00000034357 I 0.000
ATF6B Pteropus vampyrus ENSPVAG00000005144 I 0.000
Atf6b Rattus norvegicus ENSRNOG00000000431 I 0.000
Atf6 Rattus norvegicus ENSRNOG00000024632 I 0.000
ENSSHAG00000005867 Sarcophilus harrisii ENSSHAG00000005867 I 0.000
ENSSHAG00000010010 Sarcophilus harrisii ENSSHAG00000010010 I 0.000
ATF6B Sus scrofa ENSSSCG00000001430 I 0.000
ATF6 Sus scrofa ENSSSCG00000006346 I 0.000
ENSSTOG00000027684 Ictidomys tridecemlineatus ENSSTOG00000027684 I 0.000
ATF6 Tupaia belangeri ENSTBEG00000015845 I 0.000
ATF6 Taeniopygia guttata ENSTGUG00000017057 I 0.000
atf6 Takifugu rubripes ENSTRUG00000006660 I 0.000
ENSTSYG00000002035 Tarsius syrichta ENSTSYG00000002035 I 0.000
ATF6B Tursiops truncatus ENSTTRG00000005958 I 0.000
ATF6 Tursiops truncatus ENSTTRG00000008508 I 0.000
ATF6 Vicugna pacos ENSVPAG00000004732 I 0.000
ENSXMAG00000013231 Xiphophorus maculatus ENSXMAG00000013231 I 0.000
Gfo_R012350 Geospiza fortis Gfo_R012350 I 0.000
L798_08597 Zootermopsis nevadensis L798_08597 I 0.000
LotgiG236404 Lottia gigantea LotgiG236404 I 0.000
Myotis_brandtii_ATF6B_10007217 Myotis brandtii Myotis_brandtii_ATF6B_10007217 I 0.000
Myotis_brandtii_ATF6_10024274 Myotis brandtii Myotis_brandtii_ATF6_10024274 I 0.000
Ocbimv22023518m.g Octopus bimaculoides Ocbimv22023518m.g I 0.000
Ogr01669 Ophisaurus gracilis Ogr01669 I 0.000
Ogr11447 Ophisaurus gracilis Ogr11447 I 0.000
Pvit_13420 Pogona vitticeps Pvit_13420 I 0.000
Pvit_17701 Pogona vitticeps Pvit_17701 I 0.000
Sakowv30004199m.g Saccoglossus kowalevskii Sakowv30004199m.g I 0.000
atf6 Xenopus tropicalis XB-GENE-983814 I 0.000
atf6.S Xenopus laevis XB-GENE-983817 I 0.000