CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF84
(
Gorilla gorilla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGGOG00000004156
T096151_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF84
M07736_2.00
Homo sapiens
YTKCCTGTTCHYNBNNBYYBY
RVRRVNNVNRDGAACAGGMAR
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF84.RCADE.ReprocessedData
0.827
0.998
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000004078
C2H2 ZF
205
227
YECSECRKRFSKKPSLIKHQSRH
ENSGGOP00000004078
C2H2 ZF
233
255
FGCGNCGKTFPQKSQFITHHRTH
ENSGGOP00000004078
C2H2 ZF
261
283
YNCSQCGKAFSQKSQLTSHQRTH
ENSGGOP00000004078
C2H2 ZF
289
311
YECGECGKAFSRKSHLISHWRTH
ENSGGOP00000004078
C2H2 ZF
317
339
YGCNECGRAFSEKSNLINHQRIH
ENSGGOP00000004078
C2H2 ZF
345
367
FECRECGKAFSRKSQLVTHHRTH
ENSGGOP00000004078
C2H2 ZF
373
395
FGCSDCRKAFFEKSELIRHQTIH
ENSGGOP00000004078
C2H2 ZF
401
423
YECSECRKAFRERSSLINHQRTH
ENSGGOP00000004078
C2H2 ZF
430
451
GCIQCGKAFSQKSHLISHQMTH
ENSGGOP00000004078
C2H2 ZF
457
479
FICSKCGKAFSRKSQLVRHQRTH
ENSGGOP00000004078
C2H2 ZF
485
507
YECSVCGKAFSEKLSLTNHQRIH
ENSGGOP00000004078
C2H2 ZF
513
535
YVCSECGKAFCQKSHLISHQRTH
ENSGGOP00000004078
C2H2 ZF
541
563
YECSECGKAFGEKSSLATHQRTH
ENSGGOP00000004078
C2H2 ZF
569
591
YECRDCEKAFSQKSQLNTHQRIH
ENSGGOP00000004078
C2H2 ZF
597
619
YECSLCRKAFFEKSELIRHLRTH
ENSGGOP00000004078
C2H2 ZF
625
647
YECNECRKAFREKSSLINHQRIH
ENSGGOP00000004078
C2H2 ZF
653
675
FECSECGKAFSRKSHLIPHQRTH
ENSGGOP00000004078
C2H2 ZF
681
703
YGCSECRKAFSQKSQLVNHQRIH
ENSGGOP00000004078
C2H2 ZF
709
731
YRCIECGKAFSQKSQLINHQRTH
ENSGGOP00000018415
C2H2 ZF
123
145
YECSECRKRFSKKPSLIKHQSRH
ENSGGOP00000018415
C2H2 ZF
151
172
FGCGNCGKPFPRSLSLLHHRTH
ENSGGOP00000018415
C2H2 ZF
178
200
YNCSQCGKAFSQKSQLTSHQRTH
ENSGGOP00000018415
C2H2 ZF
206
228
YECGECGKAFSRKSHLISHWRTH
ENSGGOP00000018415
C2H2 ZF
234
256
YGCNECGRAFSEKSNLINHQRIH
ENSGGOP00000018415
C2H2 ZF
262
284
FECRECGKAFSRKSQLVTHHRTH
ENSGGOP00000018415
C2H2 ZF
290
312
FGCSDCRKAFFEKSELIRHQTIH
ENSGGOP00000018415
C2H2 ZF
318
340
YECSECRKAFRERSSLINHQRTH
ENSGGOP00000018415
C2H2 ZF
347
368
GCIQCGKAFSQKSHLISHQMTH
ENSGGOP00000018415
C2H2 ZF
374
396
FICSKCGKAFSRKSQLVRHQRTH
ENSGGOP00000018415
C2H2 ZF
402
424
YECSVCGKAFSEKLSLTNHQRIH
ENSGGOP00000018415
C2H2 ZF
430
452
YVCSECGKAFCQKSHLISHQRTH
ENSGGOP00000018415
C2H2 ZF
458
480
YECSECGKAFGEKSSLATHQRTH
ENSGGOP00000018415
C2H2 ZF
486
508
YECRDCEKAFSQKSQLNTHQRIH
ENSGGOP00000018415
C2H2 ZF
514
536
YECSLCRKAFFEKSELIRHLRTH
ENSGGOP00000018415
C2H2 ZF
542
564
YECNECRKAFREKSSLINHQRIH
ENSGGOP00000018415
C2H2 ZF
570
592
FECSECGKAFSRKSHLIPHQRTH
ENSGGOP00000018415
C2H2 ZF
598
620
YGCSECRKAFSQKSQLVNHQRIH
ENSGGOP00000018415
C2H2 ZF
626
648
YRCIECGKAFSQKSQLINHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Gorilla gorilla
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr3.CM0106.670.nc
Lotus japonicus
chr3.CM0106.670.nc
N
MDP0000184998
Malus domestica
MDP0000184998
N
MDP0000716430
Malus domestica
MDP0000716430
N
MTR_2g099155
Medicago truncatula
MTR_2g099155
N
PGSC0003DMG400020996
Solanum tuberosum
PGSC0003DMG400020996
N
PK16646.1
Cannabis sativa
PK16646.1
N
Pm007242
Prunus mume
Pm007242
N
PRUPE_ppa010592mg
Prunus persica
PRUPE_ppa010592mg
N
Solyc08g013980.2
Solanum lycopersicum
Solyc08g013980.2
N