CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000002669
(
Gadus morhua
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGMOG00000002669
T096703_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SNAI2
M00221_2.00
Homo sapiens
HACYTGH
DCARGTD
PBM
Barrera et al.(2016)
SNAI2_REF
0.805
0.947
SNAI2
M02873_2.00
Homo sapiens
VCACCTGYN
NRCAGGTGB
SELEX
Jolma et al.(2013)
SNAI2_1
0.805
0.947
SNAI2
M04392_2.00
Homo sapiens
YGCACCTGYY
RRCAGGTGCR
SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX
0.805
0.947
SNAI2
M04394_2.00
Homo sapiens
YRCACCTGYY
RRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX
0.805
0.947
SNAI2
M08853_2.00
Homo sapiens
NVCACCTGYY
RRCAGGTGBN
Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A
0.805
0.947
Snai2
M08973_2.00
Mus musculus
VNRCACCTGYY
RRCAGGTGYNB
Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A
0.805
0.947
SNAI2
M10102_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6_01
0.805
0.947
SNAI2
M10103_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6_02
0.805
0.947
SNAI2
M10104_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SLUG_Q6
0.805
0.947
SNAI2
M00220_2.00
Homo sapiens
NHACCTGY
RCAGGTDN
PBM
Barrera et al.(2016)
SNAI2_D119E
0.805
0.947
SNAI2
M04393_2.00
Homo sapiens
YRCACCTGYN
NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX
0.805
0.947
SNAI2
M04395_2.00
Homo sapiens
YRCACCTGYN
NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX
0.805
0.947
SNAI2
M00222_2.00
Homo sapiens
HACYTGHNNN
NNNDCARGTD
PBM
Barrera et al.(2016)
SNAI2_T234I
0.802
0.939
wor
M03664_2.00
Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC
SELEX
Nitta et al.(2015)
wor_1
0.759
0.798
wor
M03665_2.00
Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH
SELEX
Nitta et al.(2015)
wor_2
0.759
0.798
wor
M06051_2.00
Drosophila melanogaster
CACCTGY
RCAGGTG
B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983
0.759
0.798
wor
M06052_2.00
Drosophila melanogaster
VCACCTGY
RCAGGTGB
B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983
0.759
0.798
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000002798
C2H2 ZF
121
143
FQCGLCSKSYSTYSGLLKHKQLH
ENSGMOP00000002798
C2H2 ZF
152
174
FSCKYCEKEYVSLGALKMHIRTH
ENSGMOP00000002798
C2H2 ZF
178
200
CVCKICGKAFSRPWLLQGHIRTH
ENSGMOP00000002798
C2H2 ZF
207
229
FSCPHCNRAFADRSNLRAHLQTH
ENSGMOP00000002798
C2H2 ZF
235
256
YQCKNCSKTFSRMSLLHKHEES
Links
Other
C2H2 ZF
family TFs
Other
Gadus morhua
TFs
102 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R006195
Calypte anna
Aan_R006195
I
0.000
Afo_R011286
Aptenodytes forsteri
Afo_R011286
I
0.000
Alligator_sinensis_CCG021131.1
Alligator sinensis
Alligator_sinensis_CCG021131.1
I
0.000
ENSACAG00000017951
Anolis carolinensis
ENSACAG00000017951
I
0.000
ENSAMEG00000006061
Ailuropoda melanoleuca
ENSAMEG00000006061
I
0.000
ENSAMEG00000006086
Ailuropoda melanoleuca
ENSAMEG00000006086
I
0.000
ENSAMXG00000013978
Astyanax mexicanus
ENSAMXG00000013978
I
0.000
STAT5A
Bos taurus
ENSBTAG00000009496
I
0.000
STAT5B
Bos taurus
ENSBTAG00000010125
I
0.000
ENSBTAP00000034715-D1
Bos grunniens
ENSBTAP00000034715-D1
I
0.000
STAT5A
Canis familiaris
ENSCAFG00000015346
I
0.000
STAT5B
Canis familiaris
ENSCAFG00000015509
I
0.000
STAT5A
Cavia porcellus
ENSCPOG00000012203
I
0.000
ENSCPOG00000026466
Cavia porcellus
ENSCPOG00000026466
I
0.000
ENSCSAG00000003133
Chlorocebus sabaeus
ENSCSAG00000003133
I
0.000
ENSCSAG00000003196
Chlorocebus sabaeus
ENSCSAG00000003196
I
0.000
stat5a
Danio rerio
ENSDARG00000019392
I
0.000
stat5b
Danio rerio
ENSDARG00000055588
I
0.000
Stat5a
Dipodomys ordii
ENSDORG00000000303
I
0.000
STAT5B
Equus caballus
ENSECAG00000007847
I
0.000
STAT5A
Equus caballus
ENSECAG00000012328
I
0.000
STAT5A
Erinaceus europaeus
ENSEEUG00000003642
I
0.000
STAT5B
Echinops telfairi
ENSETEG00000008528
I
0.000
ENSFALG00000000667
Ficedula albicollis
ENSFALG00000000667
I
0.000
ENSFCAG00000002153
Felis catus
ENSFCAG00000002153
I
0.000
ENSFCAG00000028112
Felis catus
ENSFCAG00000028112
I
0.000
STAT5A
Homo sapiens
ENSG00000126561
D
0.000
STAT5B
Homo sapiens
ENSG00000173757
D
0.000
stat5a
Gasterosteus aculeatus
ENSGACG00000008634
I
0.000
stat5b
Gasterosteus aculeatus
ENSGACG00000015405
I
0.000
STAT5B
Gallus gallus
ENSGALG00000003282
I
0.000
STAT5B
Gorilla gorilla
ENSGGOG00000008216
I
0.000
STAT5A
Gorilla gorilla
ENSGGOG00000017103
I
0.000
ENSGMOG00000014154
Gadus morhua
ENSGMOG00000014154
I
0.000
ENSGMOG00000015001
Gadus morhua
ENSGMOG00000015001
I
0.000
ENSLACG00000002646
Latimeria chalumnae
ENSLACG00000002646
I
0.000
STAT5A
Loxodonta africana
ENSLAFG00000014055
I
0.000
ENSLOCG00000012527
Lepisosteus oculatus
ENSLOCG00000012527
I
0.000
ENSMEUG00000006640
Macropus eugenii
ENSMEUG00000006640
I
0.000
ENSMGAG00000003430
Meleagris gallopavo
ENSMGAG00000003430
I
0.000
STAT5B
Microcebus murinus
ENSMICG00000011988
I
0.000
STAT5B
Myotis lucifugus
ENSMLUG00000012050
I
0.000
STAT5A
Myotis lucifugus
ENSMLUG00000026308
I
0.000
STAT5A
Macaca mulatta
ENSMMUG00000010705
I
0.000
ENSMODG00000014816
Monodelphis domestica
ENSMODG00000014816
I
0.000
ENSMODG00000014836
Monodelphis domestica
ENSMODG00000014836
I
0.000
ENSMPUG00000010517
Mustela putorius furo
ENSMPUG00000010517
I
0.000
ENSMPUG00000010528
Mustela putorius furo
ENSMPUG00000010528
I
0.000
Stat5a
Mus musculus
ENSMUSG00000004043
D
0.000
Stat5b
Mus musculus
ENSMUSG00000020919
D
0.000
ENSNLEG00000011444
Nomascus leucogenys
ENSNLEG00000011444
I
0.000
ENSOANG00000006496
Ornithorhynchus anatinus
ENSOANG00000006496
I
0.000
ENSOARG00000000809
Ovis aries
ENSOARG00000000809
I
0.000
ENSOARG00000018964
Ovis aries
ENSOARG00000018964
I
0.000
STAT5B
Oryctolagus cuniculus
ENSOCUG00000005078
I
0.000
STAT5A
Oryctolagus cuniculus
ENSOCUG00000023066
I
0.000
STAT5A
Otolemur garnettii
ENSOGAG00000001513
I
0.000
STAT5B
Otolemur garnettii
ENSOGAG00000017198
I
0.000
ENSONIG00000001131
Oreochromis niloticus
ENSONIG00000001131
I
0.000
STAT5B
Ochotona princeps
ENSOPRG00000008312
I
0.000
STAT5A
Ochotona princeps
ENSOPRG00000008335
I
0.000
stat5a
Oryzias latipes
ENSORLG00000003961
I
0.000
stat5b
Oryzias latipes
ENSORLG00000014335
I
0.000
ENSP00000293328
Macaca fascicularis
ENSP00000293328
I
0.000
ENSP00000293328-D1
Bos grunniens
ENSP00000293328-D1
I
0.000
ENSP00000400320
Macaca fascicularis
ENSP00000400320
I
0.000
ENSPANG00000021452
Papio anubis
ENSPANG00000021452
I
0.000
ENSPANG00000021460
Papio anubis
ENSPANG00000021460
I
0.000
STAT5A
Procavia capensis
ENSPCAG00000010107
I
0.000
ENSPFOG00000010905
Poecilia formosa
ENSPFOG00000010905
I
0.000
ENSPFOG00000012581
Poecilia formosa
ENSPFOG00000012581
I
0.000
ENSPMAG00000009008
Petromyzon marinus
ENSPMAG00000009008
I
0.000
ENSPPYG00000008393
Pongo abelii
ENSPPYG00000008393
I
0.000
ENSPPYG00000008394
Pongo abelii
ENSPPYG00000008394
I
0.000
STAT5B
Pan troglodytes
ENSPTRG00000009198
I
0.000
STAT5A
Pan troglodytes
ENSPTRG00000009199
I
0.000
STAT5B
Pteropus vampyrus
ENSPVAG00000003876
I
0.000
STAT5A
Pteropus vampyrus
ENSPVAG00000003881
I
0.000
Stat5b
Rattus norvegicus
ENSRNOG00000019075
I
0.000
Stat5a
Rattus norvegicus
ENSRNOG00000019496
I
0.000
ENSSARG00000014205
Sorex araneus
ENSSARG00000014205
I
0.000
ENSSHAG00000003879
Sarcophilus harrisii
ENSSHAG00000003879
I
0.000
STAT5A
Sus scrofa
ENSSSCG00000017402
I
0.000
STAT5B
Sus scrofa
ENSSSCG00000017406
I
0.000
ENSSTOG00000006691
Ictidomys tridecemlineatus
ENSSTOG00000006691
I
0.000
ENSSTOG00000006713
Ictidomys tridecemlineatus
ENSSTOG00000006713
I
0.000
ENSTGUG00000002572
Taeniopygia guttata
ENSTGUG00000002572
I
0.000
stat5a
Tetraodon nigroviridis
ENSTNIG00000011707
I
0.000
stat5a
Takifugu rubripes
ENSTRUG00000015454
I
0.000
STAT5B
Tursiops truncatus
ENSTTRG00000006684
I
0.000
STAT5A
Tursiops truncatus
ENSTTRG00000007155
I
0.000
ENSXMAG00000005165
Xiphophorus maculatus
ENSXMAG00000005165
I
0.000
Gfo_R009045
Geospiza fortis
Gfo_R009045
I
0.000
Myotis_brandtii_STAT5A_10015329
Myotis brandtii
Myotis_brandtii_STAT5A_10015329
I
0.000
Myotis_brandtii_STAT5B_10015330
Myotis brandtii
Myotis_brandtii_STAT5B_10015330
I
0.000
Ogr09155
Ophisaurus gracilis
Ogr09155
I
0.000
Pvit_13934
Pogona vitticeps
Pvit_13934
I
0.000
stat5b.L
Xenopus laevis
XB-GENE-17341802
I
0.000
stat5b
Xenopus tropicalis
XB-GENE-5913743
I
0.000
stat5b.S
Xenopus laevis
XB-GENE-5913744
I
0.000