ENSLACG00000006007 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000006007 T097006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB12
M08269_2.00 		Homo sapiens
NNRDTCTAGAACVYNNN
NNNRBGTTCTAGAHYNN		 ChIP-seq
Najafabadi et al.(2015b)
ZBTB12 		0.811 0.942
Zbtb12
M00146_2.00 		Mus musculus
NGTTCTARRN
NYYTAGAACN		 PBM
Badis et al.(2009)
Zbtb12_2932 		0.811 0.942
ZBTB12
M04633_2.00 		Homo sapiens
RGCTGRRCCGCGYN
NRCGCGGYYCAGCY		 SELEX
Yin et al.(2017)
ZBTB12_eDBD_HT-SELEX_1 		0.811 0.942
ZBTB12
M04634_2.00 		Homo sapiens
AVGACGGCAGGCCB
VGGCCTGCCGTCBT		 SELEX
Yin et al.(2017)
ZBTB12_eDBD_HT-SELEX_2 		0.811 0.942
ZBTB12
M08389_2.00 		Homo sapiens
CTAGAACMB
VKGTTCTAG		 ChIP-seq
Schmitges et al.(2016)
Q9Y330_1-3.RCADE 		0.811 0.942
ZBTB12
M04635_2.00 		Homo sapiens
AGCTGRRCCGCGYN
NRCGCGGYYCAGCT		 SELEX
Yin et al.(2017)
ZBTB12_eDBD_Methyl-HT-SELEX_1 		0.811 0.942
ZBTB12
M04636_2.00 		Homo sapiens
RMGACGDCAGGCCW
WGGCCTGHCGTCKY		 SELEX
Yin et al.(2017)
ZBTB12_eDBD_Methyl-HT-SELEX_2 		0.811 0.942
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000006769 C2H2 ZF 372 394
ENSLACP00000006769 C2H2 ZF 400 422
ENSLACP00000006769 C2H2 ZF 428 451

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action