CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZFP30
(
Loxodonta africana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLAFG00000004782
T097254_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000004000
C2H2 ZF
167
189
YECEECGKAFRVRQQLTFHERIH
ENSLAFP00000004000
C2H2 ZF
195
217
YECKECGKTFRQCAHLSRHQRIH
ENSLAFP00000004000
C2H2 ZF
223
245
YECKKCEKIFSCGPDLRVHQRIH
ENSLAFP00000004000
C2H2 ZF
251
273
YECKECGKAFRVRGQLSLHQRIH
ENSLAFP00000004000
C2H2 ZF
279
300
YDCKECGKAFRQYAHLTRHQRL
ENSLAFP00000004000
C2H2 ZF
335
357
YECQECGKAFRVRQQLTLHQRIH
ENSLAFP00000004000
C2H2 ZF
363
385
YHCKECGKTFSRGYHLTLHQRIH
ENSLAFP00000004000
C2H2 ZF
391
413
YECKECQKFFRRYSELISHQGIH
ENSLAFP00000004000
C2H2 ZF
419
441
YECKECGKAFRLFSQLTQHQSIH
ENSLAFP00000004000
C2H2 ZF
447
469
YKCKECEKTFRLLSQLTQHQSIH
ENSLAFP00000004000
C2H2 ZF
475
497
YDCKECGKAFRLHSSLIQHQRIH
ENSLAFP00000004000
C2H2 ZF
503
525
YKCKECKKAFRQHSHLTYHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Loxodonta africana
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA026216
Oryza indica
BGIOSGA026216
I
BRADI1G20210
Brachypodium distachyon
BRADI1G20210
I
BRADI1G61477
Brachypodium distachyon
BRADI1G61477
I
F775_06570
Aegilops tauschii
F775_06570
I
GRMZM2G026417
Zea mays
GRMZM2G026417
I
GRMZM2G030458
Zea mays
GRMZM2G030458
I
GRMZM2G075122
Zea mays
GRMZM2G075122
I
GRMZM2G082318
Zea mays
GRMZM2G082318
I
LPERR07G20450
Leersia perrieri
LPERR07G20450
I
MLOC_10638
Hordeum vulgare
MLOC_10638
I
OB07G29080
Oryza brachyantha
OB07G29080
I
OBART07G23470
Oryza barthii
OBART07G23470
I
OGLUM03G19400
Oryza glumaepatula
OGLUM03G19400
I
OGLUM07G23550
Oryza glumaepatula
OGLUM07G23550
I
OMERI07G19920
Oryza meridionalis
OMERI07G19920
I
ONIVA04G28640
Oryza nivara
ONIVA04G28640
I
ONIVA07G23260
Oryza nivara
ONIVA07G23260
I
OPUNC03G17850
Oryza punctata
OPUNC03G17850
I
OPUNC07G22140
Oryza punctata
OPUNC07G22140
I
ORGLA03G0177400
Oryza glaberrima
ORGLA03G0177400
I
ORGLA07G0264000
Oryza glaberrima
ORGLA07G0264000
I
ORUFI03G19470
Oryza rufipogon
ORUFI03G19470
I
ORUFI07G24680
Oryza rufipogon
ORUFI07G24680
I
OS03G0370250
Oryza sativa
OS03G0370250
D
OS07G0636100
Oryza sativa
OS07G0636100
I
Pavir.Ba00022
Panicum virgatum
Pavir.Ba00022
I
Pavir.Bb03462
Panicum virgatum
Pavir.Bb03462
I
Pavir.Ib01769
Panicum virgatum
Pavir.Ib01769
I
Pavir.J23796
Panicum virgatum
Pavir.J23796
I
Sb01g034370
Sorghum bicolor
Sb01g034370
I
Sb02g040550
Sorghum bicolor
Sb02g040550
I
Si030239m.g
Setaria italica
Si030239m.g
I
Traes_2AS_8C5E619C6
Triticum aestivum
Traes_2AS_8C5E619C6
I
Traes_2BS_EEE045515
Triticum aestivum
Traes_2BS_EEE045515
I
Traes_2DS_6BAF1825F
Triticum aestivum
Traes_2DS_6BAF1825F
I
Traes_4AS_928691B39
Triticum aestivum
Traes_4AS_928691B39
I
Traes_4BS_96AE357C6
Triticum aestivum
Traes_4BS_96AE357C6
I
Traes_4DL_21C202E37
Triticum aestivum
Traes_4DL_21C202E37
I
TRIUR3_32773
Triticum urartu
TRIUR3_32773
I