OVOL1 (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000015644 T097388_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ovol1
M08974_2.00 		Mus musculus
WCMGTTACM
KGTAACKGW		 Misc
Kulakovskiy et al.(2013)
OVOL1_MOUSE.H11MO.0.C 		0.826 0.971
OVOL1
M04556_2.00 		Homo sapiens
NDDACCGTTAYNYN
NRNRTAACGGTHHN		 SELEX
Yin et al.(2017)
OVOL1_FL_HT-SELEX 		0.820 0.971
OVOL1
M08919_2.00 		Homo sapiens
WCMGTTACM
KGTAACKGW		 Misc
Kulakovskiy et al.(2013)
OVOL1_HUMAN.H11MO.0.C 		0.820 0.971
OVOL1
M04557_2.00 		Homo sapiens
NDDACCGTTAYNYN
NRNRTAACGGTHHN		 SELEX
Yin et al.(2017)
OVOL1_FL_Methyl-HT-SELEX 		0.820 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000013116 C2H2 ZF 118 140
ENSLAFP00000013116 C2H2 ZF 146 168
ENSLAFP00000013116 C2H2 ZF 174 197

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_16638 Phytophthora parasitica F443_16638 N
fgenesh1_kg.C_scaffold_813000002 Phytophthora capsici fgenesh1_kg.C_scaffold_813000002 N
fgenesh_scip_prom.46568.338 Phytophthora kernoviae fgenesh_scip_prom.46568.338 N
HpaG800700 Hyaloperonospora arabidopsidis HpaG800700 N
maker-pag1_scaffold_406-snap-gene-0.12 Pythium aphanidermatum maker-pag1_scaffold_406-snap-gene-0.12 N
maker-par_contig_1799-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_1799-fgenesh-gene-0.0 N
maker-pir_contig_225-snap-gene-0.15 Pythium irregulare maker-pir_contig_225-snap-gene-0.15 N
maker-piw_contig_308-snap-gene-0.10 Pythium iwayamai maker-piw_contig_308-snap-gene-0.10 N
maker-piw_contig_308-snap-gene-0.9 Pythium iwayamai maker-piw_contig_308-snap-gene-0.9 N
Phyra96060 Phytophthora ramorum Phyra96060 N
Physo138656 Phytophthora sojae Physo138656 N
PITG_05989 Phytophthora infestans PITG_05989 N