ZSCAN23 (Microcebus murinus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMICG00000010510 T098524_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN23
M04613_2.00 		Homo sapiens
NYCATGTGCTAATTACAVN
NBTGTAATTAGCACATGRN		 SELEX
Yin et al.(2017)
ZSCAN23_eDBD_HT-SELEX 		0.823 0.974
ZSCAN23
M04614_2.00 		Homo sapiens
NYCATGTGCTAATTACRHN
NDYGTAATTAGCACATGRN		 SELEX
Yin et al.(2017)
ZSCAN23_eDBD_Methyl-HT-SELEX 		0.823 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000009567 C2H2 ZF 247 269
ENSMICP00000009567 C2H2 ZF 275 297
ENSMICP00000009567 C2H2 ZF 303 325
ENSMICP00000009567 C2H2 ZF 331 353
ENSMICP00000009567 C2H2 ZF 359 381

Links

Other C2H2 ZF family TFs
Other Microcebus murinus TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29794.m003304 Ricinus communis 29794.m003304 I
IDD1 Arabidopsis thaliana AT5G66730 D
BGIOSGA008789 Oryza indica BGIOSGA008789 I
BGIOSGA016934 Oryza indica BGIOSGA016934 I
Bo3g129830 Brassica oleracea Bo3g129830 I
Bo8g080100 Brassica oleracea Bo8g080100 I
Bostr.0568s0090 Boechera stricta Bostr.0568s0090 I
Bostr.6864s0177 Boechera stricta Bostr.6864s0177 I
Bra037151 Brassica rapa Bra037151 I
BRADI2G41550 Brachypodium distachyon BRADI2G41550 I
BRADI3G51090 Brachypodium distachyon BRADI3G51090 I
BRADI5G18530 Brachypodium distachyon BRADI5G18530 I
Cagra.0926s0031 Capsella grandiflora Cagra.0926s0031 I
Cagra.2007s0026 Capsella grandiflora Cagra.2007s0026 I
Carubv10017209m.g Capsella rubella Carubv10017209m.g I
Carubv10026275m.g Capsella rubella Carubv10026275m.g I
cassava29681.valid.m1 Manihot esculenta cassava29681.valid.m1 I
cassava42858.valid.m1 Manihot esculenta cassava42858.valid.m1 I
Ca_03678 Cicer arietinum Ca_03678 I
Ciclev10007837m.g Citrus clementina Ciclev10007837m.g I
Cla014416 Citrullus lanatus Cla014416 I
Cla014763 Citrullus lanatus Cla014763 I
Cla015825 Citrullus lanatus Cla015825 I
Cucsa.163800 Cucumis sativus Cucsa.163800 I
Cucsa.190800 Cucumis sativus Cucsa.190800 I
Cucsa.201280 Cucumis sativus Cucsa.201280 I
Eucgr.B02626 Eucalyptus grandis Eucgr.B02626 I
Eucgr.I02463 Eucalyptus grandis Eucgr.I02463 I
Eucgr.J02851 Eucalyptus grandis Eucgr.J02851 I
evm.TU.supercontig_158.1 Carica papaya evm.TU.supercontig_158.1 I
F775_28900 Aegilops tauschii F775_28900 I
AtIDD2 Arabidopsis lyrata fgenesh2_kg.5__1410__AT3G50700.1 I
fgenesh2_kg.8__2743__AT5G66730.1 Arabidopsis lyrata fgenesh2_kg.8__2743__AT5G66730.1 I
gene02702-v1.0-hybrid Fragaria vesca gene02702-v1.0-hybrid I
gene29562-v1.0-hybrid Fragaria vesca gene29562-v1.0-hybrid I
GLYMA01G38290 Glycine max GLYMA01G38290 I
GLYMA03G39650 Glycine max GLYMA03G39650 I
GLYMA10G29390 Glycine max GLYMA10G29390 I
GLYMA17G34601 Glycine max GLYMA17G34601 I
GLYMA19G42280 Glycine max GLYMA19G42280 I
GLYMA20G37900 Glycine max GLYMA20G37900 I
Gorai.003G016200 Gossypium raimondii Gorai.003G016200 I
Gorai.003G016300 Gossypium raimondii Gorai.003G016300 I
Gorai.007G205300 Gossypium raimondii Gorai.007G205300 I
Gorai.010G099600 Gossypium raimondii Gorai.010G099600 I
GRMZM2G027333 Zea mays GRMZM2G027333 I
GRMZM2G129261 Zea mays GRMZM2G129261 I
GRMZM2G177693 Zea mays GRMZM2G177693 I
GRMZM5G884137 Zea mays GRMZM5G884137 I
GSMUA_Achr10G07180_001 Musa acuminata GSMUA_Achr10G07180_001 I
GSMUA_Achr10G21260_001 Musa acuminata GSMUA_Achr10G21260_001 I
GSMUA_Achr11G07460_001 Musa acuminata GSMUA_Achr11G07460_001 I
GSMUA_Achr1G02080_001 Musa acuminata GSMUA_Achr1G02080_001 I
GSMUA_Achr1G07110_001 Musa acuminata GSMUA_Achr1G07110_001 I
GSMUA_Achr2G16690_001 Musa acuminata GSMUA_Achr2G16690_001 I
GSMUA_Achr4G04310_001 Musa acuminata GSMUA_Achr4G04310_001 I
GSMUA_Achr4G07200_001 Musa acuminata GSMUA_Achr4G07200_001 I
GSMUA_Achr5G06450_001 Musa acuminata GSMUA_Achr5G06450_001 I
GSMUA_Achr5G22140_001 Musa acuminata GSMUA_Achr5G22140_001 I
GSMUA_Achr7G13540_001 Musa acuminata GSMUA_Achr7G13540_001 I
GSMUA_Achr8G10040_001 Musa acuminata GSMUA_Achr8G10040_001 I
GSMUA_AchrUn_randomG09270_001 Musa acuminata GSMUA_AchrUn_randomG09270_001 I
LPERR01G17290 Leersia perrieri LPERR01G17290 I
LPERR02G22320 Leersia perrieri LPERR02G22320 I
LPERR04G17920 Leersia perrieri LPERR04G17920 I
Lus10041723.g Linum usitatissimum Lus10041723.g I
MDP0000137126 Malus domestica MDP0000137126 I
mgf003280m Mimulus guttatus mgf003280m I
mgf006239m Mimulus guttatus mgf006239m I
MLOC_56120 Hordeum vulgare MLOC_56120 I
MLOC_57518 Hordeum vulgare MLOC_57518 I
MLOC_60958 Hordeum vulgare MLOC_60958 I
MTR_1g016010 Medicago truncatula MTR_1g016010 I
OB02G34800 Oryza brachyantha OB02G34800 I
OBART01G20150 Oryza barthii OBART01G20150 I
OBART04G21910 Oryza barthii OBART04G21910 I
OGLUM01G23770 Oryza glumaepatula OGLUM01G23770 I
OGLUM02G28000 Oryza glumaepatula OGLUM02G28000 I
OGLUM04G21940 Oryza glumaepatula OGLUM04G21940 I
OMERI01G18610 Oryza meridionalis OMERI01G18610 I
OMERI02G26740 Oryza meridionalis OMERI02G26740 I
ONIVA01G22710 Oryza nivara ONIVA01G22710 I
ONIVA02G30280 Oryza nivara ONIVA02G30280 I
ONIVA04G20460 Oryza nivara ONIVA04G20460 I
OPUNC01G20510 Oryza punctata OPUNC01G20510 I
OPUNC02G25110 Oryza punctata OPUNC02G25110 I
OPUNC03G06880 Oryza punctata OPUNC03G06880 I
OPUNC04G19640 Oryza punctata OPUNC04G19640 I
orange1.1g008017m.g Citrus sinensis orange1.1g008017m.g I
ORGLA02G0236400 Oryza glaberrima ORGLA02G0236400 I
ORUFI01G22710 Oryza rufipogon ORUFI01G22710 I
ORUFI02G28900 Oryza rufipogon ORUFI02G28900 I
ORUFI04G23520 Oryza rufipogon ORUFI04G23520 I
OS01G0572300 Oryza sativa OS01G0572300 I
OS02G0672100 Oryza sativa OS02G0672100 I
OS04G0566400 Oryza sativa OS04G0566400 I
Pavir.Ga01013 Panicum virgatum Pavir.Ga01013 I
Pavir.Gb01057 Panicum virgatum Pavir.Gb01057 I
PGSC0003DMG400008205 Solanum tuberosum PGSC0003DMG400008205 I
PGSC0003DMG400012684 Solanum tuberosum PGSC0003DMG400012684 I
PK02322.1 Cannabis sativa PK02322.1 I
PK15161.1 Cannabis sativa PK15161.1 I
Pm005517 Prunus mume Pm005517 I
Pm026593 Prunus mume Pm026593 I
POPTR_0005s12710 Populus trichocarpa POPTR_0005s12710 I
POPTR_0006s24410 Populus trichocarpa POPTR_0006s24410 I
XM_002310763.1 Populus trichocarpa POPTR_0007s12520 I
PRUPE_ppa004299mg Prunus persica PRUPE_ppa004299mg I
PRUPE_ppa004359mg Prunus persica PRUPE_ppa004359mg I
SapurV1A.0086s0480 Salix purpurea SapurV1A.0086s0480 I
SapurV1A.0255s0120 Salix purpurea SapurV1A.0255s0120 I
SapurV1A.0817s0050 Salix purpurea SapurV1A.0817s0050 I
SapurV1A.3093s0010 Salix purpurea SapurV1A.3093s0010 I
Sb03g025790 Sorghum bicolor Sb03g025790 I
Sb06g025550 Sorghum bicolor Sb06g025550 I
Si001287m.g Setaria italica Si001287m.g I
Si001504m.g Setaria italica Si001504m.g I
Si009633m.g Setaria italica Si009633m.g I
Solyc08g063040.2 Solanum lycopersicum Solyc08g063040.2 I
TCM_000429 Theobroma cacao TCM_000429 I
TCM_037300 Theobroma cacao TCM_037300 I
Thhalv10004063m.g Eutrema salsugineum Thhalv10004063m.g I
Thhalv10010353m.g Eutrema salsugineum Thhalv10010353m.g I
TRAES3BF042100060CFD_g Triticum aestivum TRAES3BF042100060CFD_g I
Traes_2AL_7ABA7B7C8 Triticum aestivum Traes_2AL_7ABA7B7C8 I
Traes_2BL_58A855C7B Triticum aestivum Traes_2BL_58A855C7B I
Traes_2DL_540050272 Triticum aestivum Traes_2DL_540050272 I
Traes_3AL_35CA14632 Triticum aestivum Traes_3AL_35CA14632 I
Traes_6DL_244C908B5 Triticum aestivum Traes_6DL_244C908B5 I
TRIUR3_35215 Triticum urartu TRIUR3_35215 I
VIT_04s0008g01160 Vitis vinifera VIT_04s0008g01160 I
VIT_04s0023g01430 Vitis vinifera VIT_04s0023g01430 I