PRDM4 (Ornithorhynchus anatinus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOANG00000005526 T102317_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM4
M02881_2.00 		Homo sapiens
TTTCAAGGCCCCC
GGGGGCCTTGAAA		 SELEX
Jolma et al.(2013)
PRDM4_1 		0.819 0.964
PRDM4
M04421_2.00 		Homo sapiens
YRRCNGTTTCAAGKCYMCCC
GGGKRGMCTTGAAACNGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX 		0.819 0.964
PRDM4
M04422_2.00 		Homo sapiens
YRGCRGTTTCRAGGSTTVCC
GGBAASCCTYGAAACYGCYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1 		0.819 0.964
PRDM4
M04423_2.00 		Homo sapiens
YRRCRGTTTCRAGKSYNCCC
GGGNRSMCTYGAAACYGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2 		0.819 0.964
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000008775 C2H2 ZF 590 612
ENSOANP00000008775 C2H2 ZF 618 640
ENSOANP00000008775 C2H2 ZF 646 668
ENSOANP00000008775 C2H2 ZF 674 696
ENSOANP00000008775 C2H2 ZF 702 724
ENSOANP00000008775 C2H2 ZF 730 751
ENSOANP00000008777 C2H2 ZF 590 612
ENSOANP00000008777 C2H2 ZF 618 640
ENSOANP00000008777 C2H2 ZF 646 668
ENSOANP00000008777 C2H2 ZF 674 696
ENSOANP00000008777 C2H2 ZF 702 724
ENSOANP00000008777 C2H2 ZF 730 751

Links

Other C2H2 ZF family TFs
Other Ornithorhynchus anatinus TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O5_02721 Cladophialophora psammophila A1O5_02721 N 0.000
AB03286.1 Alternaria brassicicola AB03286.1 I 0.000
ACRE_034210 Acremonium chrysogenum ACRE_034210 I 0.000
ARB_03643 Arthroderma benhamiae ARB_03643 I 0.000
AUEXF2481DRAFT_5486 Aureobasidium subglaciale AUEXF2481DRAFT_5486 I 0.000
BAUCODRAFT_249790 Baudoinia compniacensis BAUCODRAFT_249790 I 0.000
BBA_06988 Beauveria bassiana BBA_06988 I 0.000
Bcin15g00200 Botrytis cinerea Bcin15g00200 I 0.000
BDDG_01351 Blastomyces dermatitidis BDDG_01351 N 0.000
AFUA_2G14680 Aspergillus fumigatus CADAFUAG00004828 N 0.000
CADANGAG00012050 Aspergillus niger CADANGAG00012050 N 0.000
flbB Aspergillus nidulans CADANIAG00000648 N 0.000
CADAORAG00008810 Aspergillus oryzae CADAORAG00008810 I 0.000
ATEG_07811 Aspergillus terreus CADATEAG00001321 N 0.000
NFIA_089910 Neosartorya fischeri CADNFIAG00007772 N 0.000
CCM_01128 Cordyceps militaris CCM_01128 I 0.000
CFIO01_11126 Colletotrichum fioriniae CFIO01_11126 I 0.000
CGGC5_2437 Colletotrichum gloeosporioides CGGC5_2437 I 0.000
CH063_05360 Colletotrichum higginsianum CH063_05360 I 0.000
CMQ_566 Grosmannia clavigera CMQ_566 I 0.000
Cob_01611 Colletotrichum orbiculare Cob_01611 I 0.000
COCC4DRAFT_163657 Bipolaris maydis COCC4DRAFT_163657 I 0.000
COCCADRAFT_112191 Bipolaris zeicola COCCADRAFT_112191 I 0.000
COCMIDRAFT_80851 Bipolaris oryzae COCMIDRAFT_80851 I 0.000
COCSADRAFT_93076 Bipolaris sorokiniana COCSADRAFT_93076 I 0.000
COCVIDRAFT_31288 Bipolaris victoriae COCVIDRAFT_31288 I 0.000
CPUR_01747 Claviceps purpurea CPUR_01747 I 0.000
CSUB01_01401 Colletotrichum sublineola CSUB01_01401 I 0.000
CTHT_0003600 Chaetomium thermophilum CTHT_0003600 I 0.000
DOTSEDRAFT_164596 Dothistroma septosporum DOTSEDRAFT_164596 I 0.000
EPUS_06691 Endocarpon pusillum EPUS_06691 N 0.000
estExt_fgenesh1_pg.C_10877 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_10877 I 0.000
estExt_fgenesh3_kg.C_40226 Neurospora discreta estExt_fgenesh3_kg.C_40226 I 0.000
estExt_Genewise1.C_30429 Cochliobolus heterostrophus C5 estExt_Genewise1.C_30429 I 0.000
estExt_Genewise1Plus.C_chr_12913 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_12913 I 0.000
EURHEDRAFT_518989 Aspergillus ruber EURHEDRAFT_518989 I 0.000
EV44_g2223 Erysiphe necator EV44_g2223 I 0.000
F503_06775 Ophiostoma piceae uamh F503_06775 I 0.000
FFUJ_01507 Fusarium fujikuroi FFUJ_01507 I 0.000
fgenesh1_pg.00815_#_163 Aspergillus carbonarius fgenesh1_pg.00815_#_163 N 0.000
FGRRES_01313 Fusarium graminearum FGRRES_01313 I 0.000
FOXG_00073 Fusarium oxysporum FOXG_00073 I 0.000
FPSE_03349 Fusarium pseudograminearum FPSE_03349 I 0.000
FVEG_01443 Fusarium verticillioides FVEG_01443 I 0.000
GGTG_01216 Gaeumannomyces graminis GGTG_01216 I 0.000
GLRG_03942 Colletotrichum graminicola GLRG_03942 I 0.000
GMDG_08213 Pseudogymnoascus destructans GMDG_08213 I 0.000
GSTUM_00001612001 Tuber melanosporum GSTUM_00001612001 I 0.000
H101_02270 Trichophyton interdigitale H101_02270 I 0.000
H102_06775 Trichophyton rubrum H102_06775 I 0.000
H105_06815 Trichophyton soudanense H105_06815 I 0.000
HCBG_09056 Histoplasma capsulatum HCBG_09056 N 0.000
HMPREF1541_10536 Cyphellophora europaea HMPREF1541_10536 N 0.000
HMPREF1624_07695 Sporothrix schenckii HMPREF1624_07695 I 0.000
LEMA_P026860.1 Leptosphaeria maculans LEMA_P026860.1 I 0.000
M437DRAFT_76008 Aureobasidium melanogenum M437DRAFT_76008 I 0.000
M438DRAFT_282148 Aureobasidium pullulans M438DRAFT_282148 I 0.000
MAC_07148 Metarhizium acridum MAC_07148 I 0.000
MAJ_04559 Metarhizium majus MAJ_04559 I 0.000
MAM_03661 Metarhizium album MAM_03661 I 0.000
MANI_013653 Metarhizium anisopliae MANI_013653 I 0.000
MAPG_08236 Magnaporthe poae MAPG_08236 I 0.000
MBM_00160 Marssonina brunnea MBM_00160 I 0.000
MBR_06029 Metarhizium brunneum MBR_06029 I 0.000
MGG_00342 Magnaporthe oryzae MGG_00342 I 0.000
MGU_06448 Metarhizium guizhouense MGU_06448 I 0.000
MPH_10926 Macrophomina phaseolina MPH_10926 I 0.000
MYCFIDRAFT_86007 Pseudocercospora fijiensis MYCFIDRAFT_86007 I 0.000
Mycgr3G66896 Zymoseptoria tritici Mycgr3G66896 I 0.000
MYCTH_2297066 Myceliophthora thermophila MYCTH_2297066 I 0.000
NCU07379 Neurospora crassa NCU07379 D 0.000
NEUTE1DRAFT_105272 Neurospora tetrasperma NEUTE1DRAFT_105272 I 0.000
OCS_06036 Ophiocordyceps sinensis OCS_06036 I 0.000
OIDMADRAFT_202703 Oidiodendron maius OIDMADRAFT_202703 I 0.000
Pc12g01640 Penicillium chrysogenum Pc12g01640 I 0.000
PCH_Pc12g01640 Penicillium rubens PCH_Pc12g01640 I 0.000
PDE_06387 Penicillium oxalicum PDE_06387 N 0.000
PDIP_02990 Penicillium digitatum PDIP_02990 I 0.000
PEX1_081340 Penicillium expansum PEX1_081340 I 0.000
PFICI_01432 Pestalotiopsis fici PFICI_01432 I 0.000
PITC_020790 Penicillium italicum PITC_020790 I 0.000
PMAA_100250 Talaromyces marneffei PMAA_100250 I 0.000
PMAA_100250 Penicillium marneffei PMAA_100250 I 0.000
PODANS_1_17900 Podospora anserina PODANS_1_17900 I 0.000
PTRG_07994 Pyrenophora triticirepentis PTRG_07994 I 0.000
PTT_09501 Pyrenophora teres PTT_09501 I 0.000
PV09_01645 Verruconis gallopava PV09_01645 I 0.000
PV10_03189 Exophiala mesophila PV10_03189 I 0.000
PVAR5_8450 Byssochlamys spectabilis PVAR5_8450 N 0.000
S40285_05984 Stachybotrys chlorohalonata S40285_05984 I 0.000
S40288_06814 Stachybotrys chartarum S40288_06814 I 0.000
SBOR_9585 Sclerotinia borealis SBOR_9585 I 0.000
SEPMUDRAFT_103885 Sphaerulina musiva SEPMUDRAFT_103885 I 0.000
SETTUDRAFT_169120 Setosphaeria turcica SETTUDRAFT_169120 I 0.000
SMAC_00328 Sordaria macrospora SMAC_00328 I 0.000
SNOG_04391 Stagonospora nodorum SNOG_04391 I 0.000
SPBR_07829 Sporothrix brasiliensis SPBR_07829 I 0.000
TEQG_00005 Trichophyton equinum TEQG_00005 I 0.000
TESG_03658 Trichophyton tonsurans TESG_03658 I 0.000
THITE_2112534 Thielavia terrestris THITE_2112534 I 0.000
TRIATDRAFT_301441 Trichoderma atroviride TRIATDRAFT_301441 I 0.000
TRIREDRAFT_57840 Trichoderma reesei TRIREDRAFT_57840 I 0.000
TRIVIDRAFT_227332 Trichoderma virens TRIVIDRAFT_227332 I 0.000
TRV_01964 Trichophyton verrucosum TRV_01964 I 0.000
TSTA_058130 Talaromyces stipitatus TSTA_058130 I 0.000
UCREL1_941 Eutypa lata UCREL1_941 I 0.000
UCRPA7_4041 Togninia minima UCRPA7_4041 I 0.000
VDAG_03214 Verticillium dahliae VDAG_03214 I 0.000
VDBG_06054 Verticillium albo atrum VDBG_06054 I 0.000
VDBG_06054 Verticillium alfalfae VDBG_06054 I 0.000
VHEMI02403 Torrubiella hemipterigena VHEMI02403 I 0.000
W97_01199 Coniosporium apollinis W97_01199 I 0.000
X797_005785 Metarhizium robertsii X797_005785 I 0.000
Z517_02456 Fonsecaea pedrosoi Z517_02456 I 0.000
Z518_09586 Rhinocladiella mackenziei Z518_09586 N 0.000