CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF555
(
Otolemur garnettii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOGAG00000000383
T103336_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF555
M07682_2.00
Homo sapiens
CACACYSTSASCWKMNGAGMYGDCRCCCGC
GCGGGYGHCRKCTCNKMWGSTSASRGTGTG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF555.MEME.OriginalMapping
0.805
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000000340
C2H2 ZF
170
192
YQCQECGQVYSCRSHLRIHMRTH
ENSOGAP00000000340
C2H2 ZF
198
220
YVCKLCGKTFPRTSSLNRHMRIH
ENSOGAP00000000340
C2H2 ZF
226
248
YECEQCGKAFIYFSSLTSHVRSH
ENSOGAP00000000340
C2H2 ZF
254
276
YKCKECGKAFSYSSTFRRHMITH
ENSOGAP00000000340
C2H2 ZF
282
304
YKCKECGEAFSYSSTFRRHMISH
ENSOGAP00000000340
C2H2 ZF
310
332
HKCKECGEAFSYSSAFRRHMITH
ENSOGAP00000000340
C2H2 ZF
338
360
YECKQCGKTFIYLQSYRRHERIH
ENSOGAP00000000340
C2H2 ZF
366
388
YECKQCGKTFIYLQSFRRHERTH
ENSOGAP00000000340
C2H2 ZF
394
416
YECNQCGKTFSHPSSFRGHMRVH
ENSOGAP00000000340
C2H2 ZF
422
444
YECKQCGKTFNWPISLRKHMRTH
ENSOGAP00000000340
C2H2 ZF
450
472
YECKQCGKAFSLSACFREHVRIH
ENSOGAP00000000340
C2H2 ZF
478
500
YECKLCGKAFYCHISLQKHMRRH
ENSOGAP00000000340
C2H2 ZF
506
528
YECKQCGKAFSWPELLQQHVRTH
ENSOGAP00000000340
C2H2 ZF
534
556
YECKECGKVFKWPSSLPIHMRLH
ENSOGAP00000000340
C2H2 ZF
562
584
YKCKHCGKAFNCSSSLRRHVRIH
Links
Other
C2H2 ZF
family TFs
Other
Otolemur garnettii
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CpipJ_CPIJ004616
Culex pipiens
CpipJ_CPIJ004616
N