CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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atmin
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000009553
T104854_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000011974
C2H2 ZF
24
48
LCTVEGCGKILPNTPALNMHLVKSH
ENSORLP00000011974
C2H2 ZF
70
99
YCCPVEGCPRGPNRPFSQFSLVKQHYMKMH
ENSORLP00000011974
C2H2 ZF
104
125
HKCSKCSNGYSTEWDLKRHIED
ENSORLP00000011974
C2H2 ZF
124
153
EDCGKTYQCTCGCPYASRAALLSHIYRTGH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
H101_02695
Trichophyton interdigitale
H101_02695
N
H105_01358
Trichophyton soudanense
H105_01358
N
MCYG_08969
Microsporum canis
MCYG_08969
N
MGYG_07091
Microsporum gypseum
MGYG_07091
N
TEQG_04904
Trichophyton equinum
TEQG_04904
N
TESG_04838
Trichophyton tonsurans
TESG_04838
N