CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
si:ch211-154o6.2
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000012835
T104897_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000016076
C2H2 ZF
227
249
YRCRMCAATFFNKSDMQIHSKSH
ENSORLP00000016076
C2H2 ZF
255
277
HKCPHCAKSFANSSYLAQHIRIH
ENSORLP00000016076
C2H2 ZF
283
305
YTCSYCQKSFRQLSHLQQHTRFH
ENSORLP00000016076
C2H2 ZF
315
337
HKCPHCTKSFANSSYLAQHIRIH
ENSORLP00000016076
C2H2 ZF
343
365
YTCSYCQKSFRQLSHLQQHSRIH
ENSORLP00000016076
C2H2 ZF
371
395
YKCTHPGCEKSFTQLSNLQSHRRQH
ENSORLP00000016076
C2H2 ZF
401
423
YKCMHCNKGYVDAGSLEAHMTTH
ENSORLP00000016076
C2H2 ZF
431
453
YSCGLCHRSYTSETYLVKHMEKH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
znf384l
Danio rerio
ENSDARG00000001015
N
0.766
ENSONIG00000013041
Oreochromis niloticus
ENSONIG00000013041
I
0.772
ENSPFOG00000015360
Poecilia formosa
ENSPFOG00000015360
I
0.767
ENSXMAG00000011034
Xiphophorus maculatus
ENSXMAG00000011034
N
0.766