ENSPPYG00000000059 (Pongo abelii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPPYG00000000059 T106736_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.827 1.000
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.827 1.000
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.827 1.000
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.827 1.000
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.827 1.000
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.827 1.000
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.827 1.000
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.827 1.000
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000000056 C2H2 ZF 370 392
ENSPPYP00000000056 C2H2 ZF 411 432
ENSPPYP00000000056 C2H2 ZF 438 460
ENSPPYP00000000056 C2H2 ZF 466 489

Links

Other C2H2 ZF family TFs
Other Pongo abelii TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_007_00963 Aquilegia coerulea Aquca_007_00963 N 0.000
cassava23935.valid.m1 Manihot esculenta cassava23935.valid.m1 N 0.000
Ciclev10000383m.g Citrus clementina Ciclev10000383m.g N 0.000
Eucgr.F03610 Eucalyptus grandis Eucgr.F03610 N 0.000
gene17117-v1.0-hybrid Fragaria vesca gene17117-v1.0-hybrid N 0.000
gene29166-v1.0-hybrid Fragaria vesca gene29166-v1.0-hybrid N 0.000
MDP0000722905 Malus domestica MDP0000722905 N 0.000
orange1.1g004450m.g Citrus sinensis orange1.1g004450m.g N 0.000
POPTR_0005s27900 Populus trichocarpa POPTR_0005s27900 N 0.000
PRUPE_ppa026999mg Prunus persica PRUPE_ppa026999mg N 0.000
SapurV1A.0554s0220 Salix purpurea SapurV1A.0554s0220 N 0.000
TCM_034806 Theobroma cacao TCM_034806 N 0.000
VIT_18s0122g00530 Vitis vinifera VIT_18s0122g00530 N 0.000