ENSPSIG00000001016 (Pelodiscus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPSIG00000001016 T107377_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB6
M08364_2.00 		Homo sapiens
SBNGCTCCAKVDYCN
NGRHBMTGGAGCNVS		 ChIP-seq
Schmitges et al.(2016)
Q15916.MEME 		0.807 0.957
ZBTB6
M08940_2.00 		Homo sapiens
NRGCTCCAKCDYC
GRHGMTGGAGCYN		 Misc
Kulakovskiy et al.(2013)
ZBTB6_HUMAN.H11MO.0.C 		0.807 0.957
ZBTB6
M10307_2.00 		Homo sapiens
BGGCTCYAKSRYC
GRYSMTRGAGCCV		 Transfac
Matys et al.(2006)
V$ZID_01 		0.807 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000001014 C2H2 ZF 302 324
ENSPSIP00000001014 C2H2 ZF 327 349
ENSPSIP00000001014 C2H2 ZF 355 377
ENSPSIP00000001014 C2H2 ZF 383 406

Links

Other C2H2 ZF family TFs
Other Pelodiscus sinensis TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29825.m000322 Ricinus communis 29825.m000322 N
BGIOSGA009166 Oryza indica BGIOSGA009166 I
F775_22558 Aegilops tauschii F775_22558 N
LPERR02G28940 Leersia perrieri LPERR02G28940 I
MLOC_58499 Hordeum vulgare MLOC_58499 I
OB02G41990 Oryza brachyantha OB02G41990 I
OBART02G35180 Oryza barthii OBART02G35180 I
OGLUM02G36330 Oryza glumaepatula OGLUM02G36330 I
OLONG_007639 Oryza longistaminata OLONG_007639 I
ONIVA02G37300 Oryza nivara ONIVA02G37300 I
OPUNC02G32390 Oryza punctata OPUNC02G32390 I
ORGLA02G0304700 Oryza glaberrima ORGLA02G0304700 I
ORUFI02G36680 Oryza rufipogon ORUFI02G36680 I
OS02G0786400 Oryza sativa OS02G0786400 I
Pavir.Aa00264 Panicum virgatum Pavir.Aa00264 I
Pavir.Ab03119 Panicum virgatum Pavir.Ab03119 I
Si017415m.g Setaria italica Si017415m.g I
Traes_6AL_FF1508B19 Triticum aestivum Traes_6AL_FF1508B19 I
Traes_6BL_7755E4A8A Triticum aestivum Traes_6BL_7755E4A8A I
Traes_6DL_29EF04226 Triticum aestivum Traes_6DL_29EF04226 I
TRIUR3_11737 Triticum urartu TRIUR3_11737 N
TRIUR3_13802 Triticum urartu TRIUR3_13802 I