ENSPSIG00000012066 (Pelodiscus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPSIG00000012066 T107662_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM4
M02881_2.00 		Homo sapiens
TTTCAAGGCCCCC
GGGGGCCTTGAAA		 SELEX
Jolma et al.(2013)
PRDM4_1 		0.817 0.949
PRDM4
M04421_2.00 		Homo sapiens
YRRCNGTTTCAAGKCYMCCC
GGGKRGMCTTGAAACNGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX 		0.817 0.949
PRDM4
M04422_2.00 		Homo sapiens
YRGCRGTTTCRAGGSTTVCC
GGBAASCCTYGAAACYGCYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1 		0.817 0.949
PRDM4
M04423_2.00 		Homo sapiens
YRRCRGTTTCRAGKSYNCCC
GGGNRSMCTYGAAACYGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2 		0.817 0.949
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000013424 C2H2 ZF 437 459
ENSPSIP00000013424 C2H2 ZF 465 487
ENSPSIP00000013424 C2H2 ZF 493 515
ENSPSIP00000013424 C2H2 ZF 521 543
ENSPSIP00000013424 C2H2 ZF 549 571
ENSPSIP00000013424 C2H2 ZF 577 598

Links

Other C2H2 ZF family TFs
Other Pelodiscus sinensis TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCJAG00000000037 Callithrix jacchus ENSCJAG00000000037 I 0.000
ZNF776 Homo sapiens ENSG00000152443 D 0.000