ZFP1 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000008354 T107888_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP1
M04601_2.00 		Homo sapiens
NTWYYATACCYWGCH
DGCWRGGTATRRWAN		 SELEX
Yin et al.(2017)
ZFP1_eDBD_HT-SELEX 		0.827 1.000
ZFP1
M05854_2.00 		Homo sapiens
CCWRCHMAACTAWCC
GGWTAGTTKDGYWGG		 SMiLE-seq
Isakova et al.(2017)
ZFP1_1 		0.827 1.000
ZFP1
M05855_2.00 		Homo sapiens
NTDYBATACCCANHH
DDNTGGGTATVRHAN		 SMiLE-seq
Isakova et al.(2017)
ZFP1_2 		0.827 1.000
ZFP1
M07670_2.00 		Homo sapiens
YNMNTWTTATACCCARCCCWNMTRKCCM
KGGMYAKNWGGGYTGGGTATAAWANKNR		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP1.MEME.OriginalMapping 		0.827 1.000
ZFP1
M04602_2.00 		Homo sapiens
NTWYYATACCYWRCH
DGYWRGGTATRRWAN		 SELEX
Yin et al.(2017)
ZFP1_eDBD_Methyl-HT-SELEX 		0.827 1.000
Zfp1
M10357_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZFP1_02 		0.806 0.951
Zfp1
M10358_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZFP1_03 		0.806 0.951
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000001021 C2H2 ZF 184 206
ENSPTRP00000001021 C2H2 ZF 212 234
ENSPTRP00000001021 C2H2 ZF 240 262
ENSPTRP00000001021 C2H2 ZF 268 290
ENSPTRP00000001021 C2H2 ZF 296 318
ENSPTRP00000001021 C2H2 ZF 324 346
ENSPTRP00000001021 C2H2 ZF 352 374
ENSPTRP00000001021 C2H2 ZF 380 402

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG01574 Caenorhabditis briggsae CBG01574 I
CBN04328 Caenorhabditis brenneri CBN04328 I
CBN13407 Caenorhabditis brenneri CBN13407 I
CJA01363 Caenorhabditis japonica CJA01363 I
CRE10181 Caenorhabditis remanei CRE10181 I
CRE21648 Caenorhabditis remanei CRE21648 I
Hba_14485 Heterorhabditis bacteriophora Hba_14485 N
L889_g25034 Steinernema feltiae L889_g25034 I
L892_g30707 Steinernema scapterisci L892_g30707 I
L893_g14553 Steinernema glaseri L893_g14553 I
L898_g10100 Steinernema monticolum L898_g10100 I
Ppa-nhr-66 Pristionchus pacificus PPA17245 I
nhr-66 Caenorhabditis elegans WBGene00003656 D