ZNF548 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000024292 T108318_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF548
M07691_2.00 		Homo sapiens
CCTGCHGVCVCCBBSVYYBBG
CVVRRBSVVGGBGBCDGCAGG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF548.RCADE.OriginalMapping 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000040298 C2H2 ZF 209 231
ENSPTRP00000040298 C2H2 ZF 237 259
ENSPTRP00000040298 C2H2 ZF 265 287
ENSPTRP00000040298 C2H2 ZF 293 315
ENSPTRP00000040298 C2H2 ZF 321 343
ENSPTRP00000040298 C2H2 ZF 349 371
ENSPTRP00000040298 C2H2 ZF 377 399
ENSPTRP00000040298 C2H2 ZF 405 427
ENSPTRP00000040298 C2H2 ZF 433 455
ENSPTRP00000040298 C2H2 ZF 461 483
ENSPTRP00000040298 C2H2 ZF 489 511

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000014030 Ailuropoda melanoleuca ENSAMEG00000014030 N
ZNF592 Bos taurus ENSBTAG00000001616 N
ENSBTAP00000002120-D1 Bos grunniens ENSBTAP00000002120-D1 N
ZNF592 Canis familiaris ENSCAFG00000012909 N
ENSCSAG00000017243 Chlorocebus sabaeus ENSCSAG00000017243 N
ZNF592 Dasypus novemcinctus ENSDNOG00000037550 N
ZNF592 Equus caballus ENSECAG00000016283 N
ZNF592 Echinops telfairi ENSETEG00000006646 N
ZNF592 Homo sapiens ENSG00000166716 N
ZNF592 Gorilla gorilla ENSGGOG00000009373 N
ZNF592 Macaca mulatta ENSMMUG00000010432 N
ENSMPUG00000015616 Mustela putorius furo ENSMPUG00000015616 N
ENSNLEG00000011267 Nomascus leucogenys ENSNLEG00000011267 N
ENSOARG00000013247 Ovis aries ENSOARG00000013247 N
ENSP00000299927 Macaca fascicularis ENSP00000299927 N
ENSPANG00000022572 Papio anubis ENSPANG00000022572 N
ENSPPYG00000006882 Pongo abelii ENSPPYG00000006882 N
ZNF592 Pan troglodytes ENSPTRG00000007405 N
ENSSTOG00000012942 Ictidomys tridecemlineatus ENSSTOG00000012942 N
ZNF592 Tupaia belangeri ENSTBEG00000005454 N