CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF260
(
Pteropus vampyrus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPVAG00000006898
T108591_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF260
M08395_2.00
Homo sapiens
BYHBYNTHBYHYTCC
GGARDRVDANRVDRV
ChIP-seq
Schmitges et al.(2016)
Q3ZCT1_9-13.RCADE
0.775
0.953
ZNF260
M08959_2.00
Homo sapiens
TTTWYAYDGYTGCATASTATTCCA
TGGAATASTATGCARCHRTRWAAA
Misc
Kulakovskiy et al.(2013)
ZN260_HUMAN.H11MO.0.C
0.775
0.953
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000006512
C2H2 ZF
27
49
DECNECGKTFSLKQNLTEHKQMH
ENSPVAP00000006512
C2H2 ZF
55
77
HECTECGKVFSRVSSLTLHLRSH
ENSPVAP00000006512
C2H2 ZF
83
105
YKCSKCGKAFSQKGNFLSHQKHH
ENSPVAP00000006512
C2H2 ZF
136
158
YVCKECGKGFNGKSYLTEHKKIH
ENSPVAP00000006512
C2H2 ZF
164
186
FECNQCGRAFSQKQYLIKHQNIH
ENSPVAP00000006512
C2H2 ZF
192
214
FKCNECGKAFSQKENLIIHQRIH
ENSPVAP00000006512
C2H2 ZF
220
242
YECKGCGKAFIQKSSLIRHQRSH
ENSPVAP00000006512
C2H2 ZF
248
270
YICKECGKAFSGKSNLTEHEKIH
ENSPVAP00000006512
C2H2 ZF
276
298
YKCNECGTIFRQKQYLIKHHNIH
ENSPVAP00000006512
C2H2 ZF
304
326
YECNKCGKAFSRITSLIVHVRIH
ENSPVAP00000006512
C2H2 ZF
332
354
YECKICGKAFCQSSSLTVHMRSH
ENSPVAP00000006512
C2H2 ZF
360
382
YGCNECGKAFSQFSTLALHMRIH
ENSPVAP00000006512
C2H2 ZF
388
410
YQCSECGKAFSQKSHHIRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Pteropus vampyrus
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CAD26580
Encephalitozoon cuniculi
CAD26580
N
EBI_24936
Enterocytozoon bieneusi
EBI_24936
N
EHEL_050690
Encephalitozoon hellem
EHEL_050690
N
Eint_050630
Encephalitozoon intestinalis
Eint_050630
N
EROM_050620
Encephalitozoon romaleae
EROM_050620
N
VCUG_00840
Vavraia culicis
VCUG_00840
N