Glis1 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000000138 T108848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLIS1
M02911_2.00 		Homo sapiens
MGACCCCCCACGWHGN
NCDWCGTGGGGGGTCK		 SELEX
Jolma et al.(2013)
GLIS1_1 		0.827 1.000
GLIS1
M04564_2.00 		Homo sapiens
BMCCCCCCRCVDHSH
DSDHBGYGGGGGGKV		 SELEX
Yin et al.(2017)
GLIS1_eDBD_HT-SELEX 		0.827 1.000
GLIS1
M08345_2.00 		Homo sapiens
SNSYSYRGGRGGBV
BVCCYCCYRSRSNS		 ChIP-seq
Schmitges et al.(2016)
Q8NBF1.MEME 		0.827 1.000
GLIS1
M04565_2.00 		Homo sapiens
DCWHNGTGGGGGGTV
BACCCCCCACNDWGH		 SELEX
Yin et al.(2017)
GLIS1_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000036043 C2H2 ZF 319 346
ENSRNOP00000036043 C2H2 ZF 353 376
ENSRNOP00000036043 C2H2 ZF 382 406
ENSRNOP00000036043 C2H2 ZF 412 436
ENSRNOP00000064202 C2H2 ZF 319 346
ENSRNOP00000064202 C2H2 ZF 353 376
ENSRNOP00000064202 C2H2 ZF 382 406
ENSRNOP00000064202 C2H2 ZF 412 436

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AARA010514 Anopheles arabiensis AARA010514 N
ACHR007810 Anopheles christyi ACHR007810 N
ADIR000961 Anopheles dirus ADIR000961 N
AEPI003003 Anopheles epiroticus AEPI003003 N
AFAF020580 Anopheles farauti AFAF020580 N
AFUN002862 Anopheles funestus AFUN002862 N
AMAM011430 Anopheles maculatus AMAM011430 N
AMEC003741 Anopheles melas AMEC003741 N
AQUA008192 Anopheles quadriannulatus AQUA008192 N
ASIS000907 Anopheles sinensis ASIS000907 N