CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp213
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000021872
T109095_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF213
M08284_2.00
Homo sapiens
CKCCGCCYGVKKTCK
MGAMMBCRGGCGGMG
ChIP-seq
Schmitges et al.(2016)
O14771_1-5.RCADE
0.811
0.965
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000038605
C2H2 ZF
247
269
HSCAQCGKRFRWGSDLARHQRTH
ENSRNOP00000038605
C2H2 ZF
275
297
HKCPECDKSFRSSSDLVRHQGVH
ENSRNOP00000038605
C2H2 ZF
303
325
FSCSECGKSFSRSAYLADHQRIH
ENSRNOP00000038605
C2H2 ZF
331
353
FSCTECGKSFSLRSYLLDHRRVH
ENSRNOP00000038605
C2H2 ZF
359
381
FGCGECDKSFKQRAHLIAHQSLH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000015693
Ailuropoda melanoleuca
ENSAMEG00000015693
I
0.000
ZNF383
Canis familiaris
ENSCAFG00000030182
I
0.000
ZNF383
Choloepus hoffmanni
ENSCHOG00000009776
I
0.000
ENSCJAG00000013449
Callithrix jacchus
ENSCJAG00000013449
I
0.000
ENSCSAG00000004169
Chlorocebus sabaeus
ENSCSAG00000004169
I
0.000
ZNF383
Dasypus novemcinctus
ENSDNOG00000044355
I
0.000
ZNF383
Equus caballus
ENSECAG00000013403
I
0.000
ZNF383
Echinops telfairi
ENSETEG00000008485
I
0.000
ZNF383
Felis catus
ENSFCAG00000031886
I
0.000
ZNF383
Homo sapiens
ENSG00000188283
D
0.000
ZNF420
Gorilla gorilla
ENSGGOG00000014167
I
0.000
ZNF383
Microcebus murinus
ENSMICG00000010169
I
0.000
ZNF383
Macaca mulatta
ENSMMUG00000013914
I
0.000
ENSMPUG00000017852
Mustela putorius furo
ENSMPUG00000017852
I
0.000
Zfp383
Mus musculus
ENSMUSG00000099689
I
0.000
ENSNLEG00000027020
Nomascus leucogenys
ENSNLEG00000027020
I
0.000
ENSOARG00000005383
Ovis aries
ENSOARG00000005383
I
0.000
ZNF383
Oryctolagus cuniculus
ENSOCUG00000029068
I
0.000
ZNF383
Otolemur garnettii
ENSOGAG00000031037
I
0.000
ENSP00000340132
Macaca fascicularis
ENSP00000340132
I
0.000
ENSPANG00000008018
Papio anubis
ENSPANG00000008018
I
0.000
ENSPPYG00000009910
Pongo abelii
ENSPPYG00000009910
I
0.000
ZNF383
Pan troglodytes
ENSPTRG00000010906
I
0.000
LOC103690114
Rattus norvegicus
ENSRNOG00000020774
I
0.000
LOC103690163
Rattus norvegicus
ENSRNOG00000046305
I
0.000
ZNF383
Sus scrofa
ENSSSCG00000021946
I
0.000
ENSTSYG00000007283
Tarsius syrichta
ENSTSYG00000007283
I
0.000
ZNF383
Tursiops truncatus
ENSTTRG00000002108
I
0.000
ZNF383
Vicugna pacos
ENSVPAG00000004908
I
0.000