CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LOC102549115
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000046867
T109264_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000065656
C2H2 ZF
23
45
YECDECRKTFSLEQHFVEHKKTH
ENSRNOP00000065656
C2H2 ZF
52
72
ECTGCGEEFSKASSLTRHLRS
ENSRNOP00000065656
C2H2 ZF
79
101
YKCGNCGRTFSQRGNFLSHQKQH
ENSRNOP00000065656
C2H2 ZF
131
153
YACKECGKAFNGKSYLKEHEKIH
ENSRNOP00000065656
C2H2 ZF
159
181
FECNQCGRAFSQKQYLIKHQNVH
ENSRNOP00000065656
C2H2 ZF
187
209
FKCNECGKAFSQKENLIIHQRIH
ENSRNOP00000065656
C2H2 ZF
215
237
YECKGCGKAFIQKSSLIRHQRSH
ENSRNOP00000065656
C2H2 ZF
243
265
YTCKECGKAFSGKSNLTEHEKIH
ENSRNOP00000065656
C2H2 ZF
271
293
YKCNECGTIFRQKQYLIKHHNIH
ENSRNOP00000065656
C2H2 ZF
299
321
YECNKCGKAFSRITSLIVHVRIH
ENSRNOP00000065656
C2H2 ZF
327
349
YECKVCGKAFCQSSSLTVHMRSH
ENSRNOP00000065656
C2H2 ZF
355
377
YGCNECGKAFSQFSTLALHMRIH
ENSRNOP00000065656
C2H2 ZF
383
405
YQCSECGKAFSQKSHHIRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF260
Erinaceus europaeus
ENSEEUG00000015842
N
0.760
ZNF260
Myotis lucifugus
ENSMLUG00000017080
I
0.767
Zfp260
Mus musculus
ENSMUSG00000049421
I
0.792
ZNF260
Oryctolagus cuniculus
ENSOCUG00000029144
I
0.769
ZNF260
Pteropus vampyrus
ENSPVAG00000006898
I
0.762
Zfp260
Rattus norvegicus
ENSRNOG00000020762
N
0.827
ZNF260
Sus scrofa
ENSSSCG00000002930
I
0.762