CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LOC102547241 *(Rattus norvegicus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSRNOG00000052023	T109319_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ZFP82 M05853_2.00	Homo sapiens	CYNYHYNYARCYNYDTYN	NRAHRNRGYTRNRDRNRG	SMiLE-seq Isakova et al.(2017) ZFP82	0.781	0.953
ZFP82 M08356_2.00	Homo sapiens	AGAATTAGTRAAYTGGAARAY	RTYTTCCARTTYACTAATTCT	ChIP-seq Schmitges et al.(2016) Q8N141_6-12.RCADE	0.781	0.953
ZFP82 M08930_2.00	Homo sapiens	TTCCADTYBAYKRWDWYTYYHTTY	RAADRRARWHWYMRTVRAHTGGAA	Misc Kulakovskiy et al.(2013) ZFP82_HUMAN.H11MO.0.C	0.781	0.953
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Links
Other C2H2 ZF family TFs
Other *Rattus norvegicus* TFs

22 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ACOC_0000088801	Angiostrongylus costaricensis	ACOC_0000088801	N	0.000
ANCCAN_05988	Ancylostoma caninum	ANCCAN_05988	N	0.000
ANCCEY_03973	Ancylostoma ceylanicum	ANCCEY_03973	N	0.000
ASU_01558	Ascaris suum	ASU_01558	N	0.000
CJA36291	Caenorhabditis japonica	CJA36291	N	0.000
CRE10858	Caenorhabditis remanei	CRE10858	N	0.000
Hba_00666	Heterorhabditis bacteriophora	Hba_00666	N	0.000
HPBE_0001056201	Heligmosomoides bakeri	HPBE_0001056201	N	0.000
L889_g3780	Steinernema feltiae	L889_g3780	N	0.000
NBR_0002032801	Nippostrongylus brasiliensis	NBR_0002032801	N	0.000
NECAME_16810	Necator americanus	NECAME_16810	N	0.000
PPA10006	Pristionchus pacificus	PPA10006	N	0.000
PTRK_0000752800	Parastrongyloides trichosuri	PTRK_0000752800	N	0.000
SVE_0038800	Strongyloides venezuelensis	SVE_0038800	N	0.000
TCNE_0001343401	Toxocara canis	TCNE_0001343401	N	0.000