CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AC120712.2
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000059938
T109361_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000071844
C2H2 ZF
223
245
YKCLECGKYFYYKSQIIEHQRSH
ENSRNOP00000071844
C2H2 ZF
251
273
YECTECGKSFSYKSHLTVHHRSH
ENSRNOP00000071844
C2H2 ZF
279
301
HECTECRKVFYYKSQLTRHQRSH
ENSRNOP00000071844
C2H2 ZF
307
329
YECMECGKSFYCNTHLTLHQRIH
ENSRNOP00000071844
C2H2 ZF
335
357
YACTECGKTFSFSACLTRHQRIH
ENSRNOP00000071844
C2H2 ZF
363
385
YECTHCPKAFYFKKQLTHHEKTH
ENSRNOP00000071844
C2H2 ZF
391
413
FECKQCGKAFYWRANLTVHQKTH
ENSRNOP00000071844
C2H2 ZF
419
441
FECKQCGKAFYCKSHLTVHQRTH
ENSRNOP00000071844
C2H2 ZF
447
469
YQCSQCRKAFYSQAQLVVHQRIH
ENSRNOP00000071844
C2H2 ZF
475
497
YECKQCGKTFYSKSGLTAHQKTH
ENSRNOP00000071844
C2H2 ZF
503
525
YACKECGKAFYNKYLLIEHHRVH
ENSRNOP00000071844
C2H2 ZF
531
553
YQCTECPKAFYCKKYLSLHQKTH
ENSRNOP00000071844
C2H2 ZF
559
581
FYCAECGKAFSWMSHLTQHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sp140
Mus musculus
ENSMUSG00000070031
I
Sp140
Rattus norvegicus
ENSRNOG00000022800
I
XP_001473574.2
Mus musculus
XP_001473574.2
D