ZNF250 (Sorex araneus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSARG00000004999 T109455_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF250
M04619_2.00 		Homo sapiens
NYASGCCYAY
RTRGGCSTRN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX 		0.804 0.940
ZNF250
M08370_2.00 		Homo sapiens
CYYTGCAGB
VCTGCARRG		 ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE 		0.804 0.940
ZNF250
M08264_2.00 		Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF250 		0.804 0.940
ZNF250
M08944_2.00 		Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA		 Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C 		0.804 0.940
ZNF250
M04620_2.00 		Homo sapiens
NTAGGCCTAN
NTAGGCCTAN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX 		0.804 0.940
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000004522 C2H2 ZF 187 209
ENSSARP00000004522 C2H2 ZF 215 237
ENSSARP00000004522 C2H2 ZF 243 265
ENSSARP00000004522 C2H2 ZF 271 293
ENSSARP00000004522 C2H2 ZF 299 321
ENSSARP00000004522 C2H2 ZF 327 349
ENSSARP00000004522 C2H2 ZF 355 377
ENSSARP00000004522 C2H2 ZF 383 405
ENSSARP00000004522 C2H2 ZF 411 433
ENSSARP00000004522 C2H2 ZF 439 461
ENSSARP00000004522 C2H2 ZF 467 489
ENSSARP00000004522 C2H2 ZF 495 517
ENSSARP00000004522 C2H2 ZF 523 545

Links

Other C2H2 ZF family TFs
Other Sorex araneus TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB006980 Anopheles albimanus AALB006980 N
AARA005409 Anopheles arabiensis AARA005409 N
AATE000184 Anopheles atroparvus AATE000184 N
ACHR010056 Anopheles christyi ACHR010056 N
ACUA015517 Anopheles culicifacies ACUA015517 N
ADAC003797 Anopheles darlingi ADAC003797 N
ADIR005231 Anopheles dirus ADIR005231 N
AEPI007014 Anopheles epiroticus AEPI007014 N
AFAF000263 Anopheles farauti AFAF000263 N
AGAP010938 Anopheles gambiae AGAP010938 N
AMEC005990 Anopheles melas AMEC005990 N
AMEM007153 Anopheles merus AMEM007153 N
AMIN009258 Anopheles minimus AMIN009258 N
ASIS000460 Anopheles sinensis ASIS000460 N
ASTEI09017 Anopheles stephensi ASTEI09017 N
CPIJ006000 Culex quinquefasciatus CPIJ006000 N
CpipJ_CPIJ006000 Culex pipiens CpipJ_CPIJ006000 N