CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSHAG00000016773
(
Sarcophilus harrisii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSHAG00000016773
T110119_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IKZF1
M08939_2.00
Homo sapiens
HYTCCCAV
BTGGGARD
Misc
Kulakovskiy et al.(2013)
IKZF1_HUMAN.H11MO.0.C
0.827
1.000
IKZF1
M10301_2.00
Homo sapiens
NHBYGGGAAYRYB
VRYRTTCCCRVDN
Transfac
Matys et al.(2006)
V$IK1_01
0.827
1.000
IKZF1
M10302_2.00
Homo sapiens
BNNWTCCCRNNN
NNNYGGGAWNNV
Transfac
Matys et al.(2006)
V$IK2_01
0.827
1.000
IKZF1
M10303_2.00
Homo sapiens
KNYHGGGAAYRYY
RRYRTTCCCDRNM
Transfac
Matys et al.(2006)
V$IK3_01
0.827
1.000
IKZF1
M10304_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IK_Q5_01
0.827
1.000
IKZF1
M10305_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IK_Q5
0.827
1.000
IKZF1
M10306_2.00
Homo sapiens
YYTCCCARA
TYTGGGARR
Transfac
Matys et al.(2006)
V$LYF1_01
0.827
1.000
Ikzf1
M08969_2.00
Mus musculus
HYTCCCAV
BTGGGARD
Misc
Kulakovskiy et al.(2013)
IKZF1_MOUSE.H11MO.0.C
0.827
0.989
IKZF2
M10105_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HELIOSA_01
0.804
0.913
IKZF2
M10106_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HELIOSA_02
0.804
0.913
IKZF3
M08320_2.00
Homo sapiens
TTCCCNNSB
VSNNGGGAA
ChIP-seq
Schmitges et al.(2016)
Q9UKT9_2-4.RCADE
0.790
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000019757
C2H2 ZF
117
139
LKCDICGIICIGPNVLMVHKRSH
ENSSHAP00000019757
C2H2 ZF
145
167
FQCNQCGASFTQKGNLLRHIKLH
ENSSHAP00000019757
C2H2 ZF
173
195
FKCHLCNYACRRRDALTGHLRTH
ENSSHAP00000019757
C2H2 ZF
201
224
HKCGYCGRSYKQRSSLEEHKERCH
Links
Other
C2H2 ZF
family TFs
Other
Sarcophilus harrisii
TFs
168 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
1967_YBR240C
Saccharomyces paradoxus
1967_YBR240C
I
0.000
2117_YBR240C
Saccharomyces bayanus
2117_YBR240C
I
0.000
4848_YBR240C
Saccharomyces mikatae
4848_YBR240C
I
0.000
AGOS_AFL033W
Ashbya gossypii
AGOS_AFL033W
I
0.000
COCC4DRAFT_157715
Bipolaris maydis
COCC4DRAFT_157715
N
0.000
COCCADRAFT_34908
Bipolaris zeicola
COCCADRAFT_34908
N
0.000
COCSADRAFT_130198
Bipolaris sorokiniana
COCSADRAFT_130198
N
0.000
COCVIDRAFT_107313
Bipolaris victoriae
COCVIDRAFT_107313
N
0.000
Ecym_2263
Eremothecium cymbalariae
Ecym_2263
I
0.000
fgenesh1_pg.sca_32_chr11_3_0000153
Nectria haematococca
fgenesh1_pg.sca_32_chr11_3_0000153
N
0.000
HMPREF1120_05596
Exophiala dermatitidis
HMPREF1120_05596
I
0.000
KAFR_0G03520
Kazachstania africana
KAFR_0G03520
I
0.000
KLLA0_F10373g
Kluyveromyces lactis
KLLA0_F10373g
I
0.000
KLTH0H05720g
Lachancea thermotolerans
KLTH0H05720g
I
0.000
KLTH0H05720g
Kluyveromyces thermotolerans
KLTH0H05720g
I
0.000
Kpol_534p28
Vanderwaltozyma polyspora
Kpol_534p28
I
0.000
Kwal_1631
Kluyveromyces waltii
Kwal_1631
I
0.000
LALA0_S13e03268g
Lachancea lanzarotensis
LALA0_S13e03268g
I
0.000
NCAS_0H01240
Naumovozyma castellii
NCAS_0H01240
I
0.000
NDAI_0F02050
Naumovozyma dairenensis
NDAI_0F02050
I
0.000
NechaG86758
Fusarium solani
NechaG86758
N
0.000
SAKL0A06072g
Lachancea kluyveri
SAKL0A06072g
I
0.000
Scas_Contig597.4
Saccharomyces castellii
Scas_Contig597.4
I
0.000
SKUD_138702
Saccharomyces kudriavzevii
SKUD_138702
I
0.000
SU7_0277
Saccharomyces arboricola
SU7_0277
I
0.000
TDEL_0B04000
Torulaspora delbrueckii
TDEL_0B04000
I
0.000
THI2
Saccharomyces cerevisiae
YBR240C
D
0.000
ZBAI_04285
Zygosaccharomyces bailii
ZBAI_04285
I
0.000
ZBAI_07794
Zygosaccharomyces bailii
ZBAI_07794
I
0.000
ZYRO0G21626g
Zygosaccharomyces rouxii
ZYRO0G21626g
I
0.000