CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZNF653
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000013616
T110382_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF653
M08248_2.00
Homo sapiens
NWTTHNYDHCYKCCGACWNHWAWD
HWTWDNWGTCGGMRGDHRNDAAWN
ChIP-seq
Najafabadi et al.(2015b)
ZNF653
0.825
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000014470
C2H2 ZF
473
498
FHCPYEGCSQVYVALSSFQNHVNLVH
ENSSSCP00000014470
C2H2 ZF
504
528
KVCPHPGCGKKFYLSNHLRRHMIIH
ENSSSCP00000014470
C2H2 ZF
534
556
FTCETCGKSFKRKNHLEVHRRTH
ENSSSCP00000014470
C2H2 ZF
562
584
LQCEICGYQCRQRASLNWHMKKH
ENSSSCP00000014470
C2H2 ZF
592
615
FTCERCGKRFEKLDSVKFHTLKSH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy