ZFP28 (Sus scrofa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSSCG00000027774 T110569_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP28
M08378_2.00 		Homo sapiens
DNNHNNHNHDDBMKYTCHDTTTCYTYWDNK
NAYMNHWRARGAAAHDGARMKVHHDNDNND		 ChIP-seq
Schmitges et al.(2016)
Q8NHY6_2-12.RCADE 		0.769 0.938
ZFP28
M08949_2.00 		Homo sapiens
YTCTRTTTCTTCTKRWGTCA
TGACWYMAGAAGAAAYAGAR		 Misc
Kulakovskiy et al.(2013)
ZFP28_HUMAN.H11MO.0.C 		0.769 0.938
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000021180 C2H2 ZF 422 444
ENSSSCP00000021180 C2H2 ZF 450 472
ENSSSCP00000021180 C2H2 ZF 478 501
ENSSSCP00000021180 C2H2 ZF 507 529
ENSSSCP00000021180 C2H2 ZF 535 557
ENSSSCP00000021180 C2H2 ZF 563 585
ENSSSCP00000021180 C2H2 ZF 591 613
ENSSSCP00000021180 C2H2 ZF 619 641
ENSSSCP00000021180 C2H2 ZF 647 669
ENSSSCP00000021180 C2H2 ZF 675 697
ENSSSCP00000021180 C2H2 ZF 703 725
ENSSSCP00000021180 C2H2 ZF 731 753
ENSSSCP00000021180 C2H2 ZF 759 781
ENSSSCP00000021180 C2H2 ZF 787 809

Links

Other C2H2 ZF family TFs
Other Sus scrofa TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA034827 Oryza indica BGIOSGA034827 N 0.000
BGIOSGA034828 Oryza indica BGIOSGA034828 N 0.000
BGIOSGA037021 Oryza indica BGIOSGA037021 N 0.000
BRADI4G42120 Brachypodium distachyon BRADI4G42120 N 0.000
F775_01937 Aegilops tauschii F775_01937 N 0.000
F775_21880 Aegilops tauschii F775_21880 N 0.000
GSMUA_Achr5G17460_001 Musa acuminata GSMUA_Achr5G17460_001 N 0.000
GSMUA_Achr9G02570_001 Musa acuminata GSMUA_Achr9G02570_001 N 0.000
LPERR11G02970 Leersia perrieri LPERR11G02970 N 0.000
LPERR12G03230 Leersia perrieri LPERR12G03230 N 0.000
MLOC_15316 Hordeum vulgare MLOC_15316 N 0.000
MLOC_22590 Hordeum vulgare MLOC_22590 N 0.000
OB11G12850 Oryza brachyantha OB11G12850 N 0.000
OB12G13360 Oryza brachyantha OB12G13360 N 0.000
OBART11G03540 Oryza barthii OBART11G03540 N 0.000
OGLUM11G03180 Oryza glumaepatula OGLUM11G03180 N 0.000
OGLUM12G04120 Oryza glumaepatula OGLUM12G04120 N 0.000
OLONG_000717 Oryza longistaminata OLONG_000717 N 0.000
OLONG_019285 Oryza longistaminata OLONG_019285 N 0.000
OMERI11G03240 Oryza meridionalis OMERI11G03240 N 0.000
ONIVA07G22930 Oryza nivara ONIVA07G22930 N 0.000
ONIVA12G03070 Oryza nivara ONIVA12G03070 N 0.000
OPUNC11G03240 Oryza punctata OPUNC11G03240 N 0.000
OPUNC12G03250 Oryza punctata OPUNC12G03250 N 0.000
ORGLA11G0032900 Oryza glaberrima ORGLA11G0032900 N 0.000
ORUFI11G03430 Oryza rufipogon ORUFI11G03430 N 0.000
ORUFI12G03900 Oryza rufipogon ORUFI12G03900 N 0.000
OS11G0154900 Oryza sativa OS11G0154900 N 0.000
Pavir.Ca00162 Panicum virgatum Pavir.Ca00162 N 0.000
Pavir.Cb02058 Panicum virgatum Pavir.Cb02058 N 0.000
Pavir.Hb01810 Panicum virgatum Pavir.Hb01810 N 0.000
Pavir.J28001 Panicum virgatum Pavir.J28001 N 0.000
Sb05g003420 Sorghum bicolor Sb05g003420 N 0.000
Sb08g003500 Sorghum bicolor Sb08g003500 N 0.000
Si012481m.g Setaria italica Si012481m.g N 0.000
Si026452m.g Setaria italica Si026452m.g N 0.000
Traes_4AL_792F1D482 Triticum aestivum Traes_4AL_792F1D482 N 0.000
Traes_4BS_8439AC445 Triticum aestivum Traes_4BS_8439AC445 N 0.000
Traes_4DS_FAFED0328 Triticum aestivum Traes_4DS_FAFED0328 N 0.000
Traes_5AL_09C375647 Triticum aestivum Traes_5AL_09C375647 N 0.000
Traes_5BL_6C613A3D9 Triticum aestivum Traes_5BL_6C613A3D9 N 0.000
Traes_5DL_A528A05A3 Triticum aestivum Traes_5DL_A528A05A3 N 0.000
TRIUR3_33961 Triticum urartu TRIUR3_33961 N 0.000