CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000022550
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000022550
T110873_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP41
M04597_2.00
Homo sapiens
NGCTAACTCTCCRYN
NRYGGAGAGTTAGCN
SELEX
Yin et al.(2017)
ZFP41_FL_HT-SELEX
0.814
0.935
ZFP41
M04598_2.00
Homo sapiens
BGCTAACTCTCCRCN
NGYGGAGAGTTAGCV
SELEX
Yin et al.(2017)
ZFP41_FL_Methyl-HT-SELEX
0.814
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000023875
C2H2 ZF
87
109
YECSECGRIFKHKTDHIRHQRVH
ENSSTOP00000023875
C2H2 ZF
115
137
FKCGQCGKTFRHSSDVTKHQRVH
ENSSTOP00000023875
C2H2 ZF
143
165
FKCGECGKAFNCGSNLLKHQKTH
ENSSTOP00000023875
C2H2 ZF
171
193
YECQECGKAFAYSSCLIRHRKRH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_05449
Capronia coronata
A1O1_05449
N
A1O5_02718
Cladophialophora psammophila
A1O5_02718
N
PV05_10155
Exophiala xenobiotica
PV05_10155
N
PV07_11051
Cladophialophora immunda
PV07_11051
N
PV10_03192
Exophiala mesophila
PV10_03192
N
PV11_09073
Exophiala sideris
PV11_09073
N
Z517_02458
Fonsecaea pedrosoi
Z517_02458
N
Z518_09583
Rhinocladiella mackenziei
Z518_09583
N
Z519_07255
Cladophialophora bantiana
Z519_07255
N