CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000023930
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000023930
T110903_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLI4
M08394_2.00
Homo sapiens
TKRNCNTGGCATTCAAGGCYY
RRGCCTTGAATGCCANGNYMA
ChIP-seq
Schmitges et al.(2016)
P10075.MEME
0.824
0.988
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000017552
C2H2 ZF
182
204
HRCEACGKSFKYNSLLLKHQRIH
ENSSTOP00000017552
C2H2 ZF
210
232
YACHECGKRFRGWSGFIQHHRIH
ENSSTOP00000017552
C2H2 ZF
238
260
YECGQCGRAFSHSSHFTQHLRIH
ENSSTOP00000017552
C2H2 ZF
266
288
YKCRECGQAFSQSSNLVRHQRLH
ENSSTOP00000017552
C2H2 ZF
294
316
YACSQCGKAFIWSSVLIEHQRIH
ENSSTOP00000017552
C2H2 ZF
322
344
YECADCGKAFRGRSHFFRHLRTH
ENSSTOP00000017552
C2H2 ZF
350
372
FACGACGKAFGQSSQLIQHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action