ZBTB18 (Taeniopygia guttata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTGUG00000008247 T111424_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.827 1.000
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.827 1.000
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.827 1.000
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.827 1.000
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.827 1.000
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.827 1.000
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.827 1.000
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.827 1.000
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000008494 C2H2 ZF 370 392
ENSTGUP00000008494 C2H2 ZF 411 432
ENSTGUP00000008494 C2H2 ZF 438 460
ENSTGUP00000008494 C2H2 ZF 466 489

Links

Other C2H2 ZF family TFs
Other Taeniopygia guttata TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA017449 Oryza indica BGIOSGA017449 N 0.000
BRADI2G14372 Brachypodium distachyon BRADI2G14372 N 0.000
GRMZM2G018048 Zea mays GRMZM2G018048 N 0.000
GRMZM2G350684 Zea mays GRMZM2G350684 N 0.000
MLOC_60761 Hordeum vulgare MLOC_60761 N 0.000
OB05G35500 Oryza brachyantha OB05G35500 N 0.000
OBART05G28000 Oryza barthii OBART05G28000 N 0.000
OGLUM05G29460 Oryza glumaepatula OGLUM05G29460 N 0.000
OLONG_007975 Oryza longistaminata OLONG_007975 N 0.000
OMERI05G23880 Oryza meridionalis OMERI05G23880 N 0.000
ONIVA05G29890 Oryza nivara ONIVA05G29890 N 0.000
OPUNC05G25580 Oryza punctata OPUNC05G25580 N 0.000
OPUNC05G25600 Oryza punctata OPUNC05G25600 N 0.000
ORUFI05G29980 Oryza rufipogon ORUFI05G29980 N 0.000
Pavir.J00429 Panicum virgatum Pavir.J00429 N 0.000
Pavir.J03231 Panicum virgatum Pavir.J03231 N 0.000
Si020947m.g Setaria italica Si020947m.g N 0.000
Traes_1DL_7773A9BFB Triticum aestivum Traes_1DL_7773A9BFB N 0.000
Traes_3AL_06889C77D Triticum aestivum Traes_3AL_06889C77D N 0.000
Traes_3DL_FC1A52B36 Triticum aestivum Traes_3DL_FC1A52B36 N 0.000
TRIUR3_17785 Triticum urartu TRIUR3_17785 N 0.000