HIC2 (Taeniopygia guttata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTGUG00000008699 T111433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN

NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.825 0.974
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN

NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.793 0.861
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC

GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.793 0.861
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN

NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.793 0.861
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH

DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.793 0.861
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000008954 C2H2 ZF 403 425
ENSTGUP00000008954 C2H2 ZF 461 483
ENSTGUP00000008954 C2H2 ZF 489 511
ENSTGUP00000008954 C2H2 ZF 517 539
ENSTGUP00000008954 C2H2 ZF 545 567

Links

Other C2H2 ZF family TFs
Other Taeniopygia guttata TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMXG00000003053 Astyanax mexicanus ENSAMXG00000003053 N
MAZ Danio rerio ENSDARG00000063555 N
ENSGACG00000007577 Gasterosteus aculeatus ENSGACG00000007577 N
ENSGACG00000014840 Gasterosteus aculeatus ENSGACG00000014840 I
ENSONIG00000009401 Oreochromis niloticus ENSONIG00000009401 N
ENSORLG00000000210 Oryzias latipes ENSORLG00000000210 N
ENSPFOG00000005397 Poecilia formosa ENSPFOG00000005397 N
ENSPFOG00000016219 Poecilia formosa ENSPFOG00000016219 N
ENSTNIG00000001006 Tetraodon nigroviridis ENSTNIG00000001006 N
ENSTRUG00000004091 Takifugu rubripes ENSTRUG00000004091 N
si:ch211-166g5.4 Takifugu rubripes ENSTRUG00000008158 N
ENSXMAG00000010895 Xiphophorus maculatus ENSXMAG00000010895 N