CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HIC2
(
Taeniopygia guttata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTGUG00000008699
T111433_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN
NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.825
0.974
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN
NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.793
0.861
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.793
0.861
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN
NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.793
0.861
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH
DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.793
0.861
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000008954
C2H2 ZF
403
425
YVCIPCGKGFPSSEQLNAHVETH
ENSTGUP00000008954
C2H2 ZF
461
483
FKCSVCEKSYKDPATLRQHEKTH
ENSTGUP00000008954
C2H2 ZF
489
511
FPCNICGKMFTQRGTMTRHMRSH
ENSTGUP00000008954
C2H2 ZF
517
539
FACEECGMRFTRQYRLTEHMRVH
ENSTGUP00000008954
C2H2 ZF
545
567
YECQLCGGKFTQQRNLISHLRMH
Links
Other
C2H2 ZF
family TFs
Other
Taeniopygia guttata
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000003053
Astyanax mexicanus
ENSAMXG00000003053
N
MAZ
Danio rerio
ENSDARG00000063555
N
ENSGACG00000007577
Gasterosteus aculeatus
ENSGACG00000007577
N
ENSGACG00000014840
Gasterosteus aculeatus
ENSGACG00000014840
I
ENSONIG00000009401
Oreochromis niloticus
ENSONIG00000009401
N
ENSORLG00000000210
Oryzias latipes
ENSORLG00000000210
N
ENSPFOG00000005397
Poecilia formosa
ENSPFOG00000005397
N
ENSPFOG00000016219
Poecilia formosa
ENSPFOG00000016219
N
ENSTNIG00000001006
Tetraodon nigroviridis
ENSTNIG00000001006
N
ENSTRUG00000004091
Takifugu rubripes
ENSTRUG00000004091
N
si:ch211-166g5.4
Takifugu rubripes
ENSTRUG00000008158
N
ENSXMAG00000010895
Xiphophorus maculatus
ENSXMAG00000010895
N