CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
prdm1
(
Takifugu rubripes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTRUG00000000404
T112188_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000000947
C2H2 ZF
550
572
YECNVCSKTFGQLSNLKVHLRVH
ENSTRUP00000000947
C2H2 ZF
578
600
FKCQTCNKGFTQLAHLQKHYLVH
ENSTRUP00000000947
C2H2 ZF
606
628
HECQVCHKRFSSTSNLKTHLRLH
ENSTRUP00000000947
C2H2 ZF
634
656
YHCKLCPAKFTQFVHLKLHKRLH
Links
Other
C2H2 ZF
family TFs
Other
Takifugu rubripes
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_04931
Capronia epimyces
A1O3_04931
I
0.000
ARB_00240
Arthroderma benhamiae
ARB_00240
I
0.000
BAUCODRAFT_42445
Baudoinia compniacensis
BAUCODRAFT_42445
N
0.000
ACLA_084900
Aspergillus clavatus
CADACLAG00007495
I
0.000
CADAFLAG00004637
Aspergillus flavus
CADAFLAG00004637
I
0.000
CADAFLAG00004736
Aspergillus flavus
CADAFLAG00004736
I
0.000
AFUA_6G11230
Aspergillus fumigatus
CADAFUAG00002339
I
0.000
AFUA_3G13600
Aspergillus fumigatus
CADAFUAG00005567
I
0.000
CADANGAG00007073
Aspergillus niger
CADANGAG00007073
I
0.000
ANIA_00568
Aspergillus nidulans
CADANIAG00002110
D
0.000
CADAORAG00007608
Aspergillus oryzae
CADAORAG00007608
I
0.000
CADAORAG00007699
Aspergillus oryzae
CADAORAG00007699
I
0.000
ATEG_05044
Aspergillus terreus
CADATEAG00003666
I
0.000
NFIA_056930
Neosartorya fischeri
CADNFIAG00005285
I
0.000
CIMG_04445
Coccidioides immitis
CIMG_04445
I
0.000
COCC4DRAFT_206179
Bipolaris maydis
COCC4DRAFT_206179
N
0.000
COCCADRAFT_108754
Bipolaris zeicola
COCCADRAFT_108754
N
0.000
COCMIDRAFT_37024
Bipolaris oryzae
COCMIDRAFT_37024
N
0.000
COCSADRAFT_246908
Bipolaris sorokiniana
COCSADRAFT_246908
N
0.000
COCVIDRAFT_102886
Bipolaris victoriae
COCVIDRAFT_102886
N
0.000
estExt_Genewise1.C_290150
Cochliobolus heterostrophus C5
estExt_Genewise1.C_290150
N
0.000
EURHEDRAFT_465981
Aspergillus ruber
EURHEDRAFT_465981
I
0.000
e_gw1.36.139.1
Nectria haematococca
e_gw1.36.139.1
I
0.000
FFUJ_11305
Fusarium fujikuroi
FFUJ_11305
N
0.000
fgenesh1_pm.00659_#_1
Aspergillus carbonarius
fgenesh1_pm.00659_#_1
I
0.000
FOXG_17625
Fusarium oxysporum
FOXG_17625
N
0.000
GLRG_07904
Colletotrichum graminicola
GLRG_07904
I
0.000
H101_00939
Trichophyton interdigitale
H101_00939
I
0.000
H102_02125
Trichophyton rubrum
H102_02125
I
0.000
H105_02141
Trichophyton soudanense
H105_02141
I
0.000
HMPREF1624_07087
Sporothrix schenckii
HMPREF1624_07087
I
0.000
HPODL_04995
Ogataea parapolymorpha
HPODL_04995
N
0.000
MCYG_05706
Microsporum canis
MCYG_05706
I
0.000
MCYG_05706
Arthroderma otae
MCYG_05706
I
0.000
MGYG_02800
Microsporum gypseum
MGYG_02800
I
0.000
NechaG51686
Fusarium solani
NechaG51686
I
0.000
PDE_07973
Penicillium oxalicum
PDE_07973
I
0.000
PFICI_11852
Pestalotiopsis fici
PFICI_11852
I
0.000
PMAA_052840
Penicillium marneffei
PMAA_052840
I
0.000
PMAA_052840
Talaromyces marneffei
PMAA_052840
I
0.000
PTRG_04441
Pyrenophora triticirepentis
PTRG_04441
N
0.000
PTT_18868
Pyrenophora teres
PTT_18868
N
0.000
PV06_00500
Exophiala oligosperma
PV06_00500
I
0.000
PV08_01656
Exophiala spinifera
PV08_01656
I
0.000
PVAR5_6400
Byssochlamys spectabilis
PVAR5_6400
I
0.000
SETTUDRAFT_106973
Setosphaeria turcica
SETTUDRAFT_106973
N
0.000
SPBR_03934
Sporothrix brasiliensis
SPBR_03934
I
0.000
TEQG_00731
Trichophyton equinum
TEQG_00731
I
0.000
TESG_04636
Trichophyton tonsurans
TESG_04636
I
0.000
TRV_05232
Trichophyton verrucosum
TRV_05232
I
0.000
TSTA_020100
Talaromyces stipitatus
TSTA_020100
I
0.000
TSTA_122680
Talaromyces stipitatus
TSTA_122680
I
0.000
U727_00433165191
Penicillium solitum
U727_00433165191
I
0.000
UREG_01672
Uncinocarpus reesii
UREG_01672
I
0.000
VDAG_05903
Verticillium dahliae
VDAG_05903
I
0.000
VDAG_07912
Verticillium dahliae
VDAG_07912
I
0.000
VDBG_01341
Verticillium alfalfae
VDBG_01341
I
0.000
VDBG_01341
Verticillium albo atrum
VDBG_01341
I
0.000
VDBG_06838
Verticillium alfalfae
VDBG_06838
I
0.000
VDBG_06838
Verticillium albo atrum
VDBG_06838
I
0.000