CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF345
(
Vicugna pacos
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSVPAG00000011869
T113674_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF345
M04653_2.00
Homo sapiens
NGTMCRGTTGYNBRBGTTGCAA
TTGCAACVYVNRCAACYGKACN
SELEX
Yin et al.(2017)
ZNF345_eDBD_HT-SELEX
0.803
0.928
ZNF345
M04654_2.00
Homo sapiens
TYGCAACVYNNRCAACTGKACB
VGTMCAGTTGYNNRBGTTGCRA
SELEX
Yin et al.(2017)
ZNF345_eDBD_Methyl-HT-SELEX
0.803
0.928
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000011045
C2H2 ZF
62
84
LECKECGKDFTFVSVLIRHQRIH
ENSVPAP00000011045
C2H2 ZF
90
112
YECKECGKAFGSGANLAYHQRIH
ENSVPAP00000011045
C2H2 ZF
118
140
YECSECGKAFGSGSNLAHHQRIH
ENSVPAP00000011045
C2H2 ZF
146
168
YECKECGKAFSFGSGLIRHQIIH
ENSVPAP00000011045
C2H2 ZF
174
196
YECKECGKSFSFESALTRHHRIH
ENSVPAP00000011045
C2H2 ZF
202
224
YECKDCGKAFGSGSNLTQHRRIH
ENSVPAP00000011045
C2H2 ZF
230
252
YECKACGMSFSSGSALTRHQRIH
ENSVPAP00000011045
C2H2 ZF
258
280
YVCNECGKAFSFGSALTRHQRIH
ENSVPAP00000011045
C2H2 ZF
286
308
YVCKECGKAFNSGSDLTQHQRIH
ENSVPAP00000011045
C2H2 ZF
314
336
YECRECEKAFRSGSKLIQHQRMH
ENSVPAP00000011045
C2H2 ZF
342
364
YECKECRKAFSSGSDLSQHQRIH
ENSVPAP00000011045
C2H2 ZF
370
392
YECKECGKAFGSGSKLIQHQLIH
ENSVPAP00000011045
C2H2 ZF
398
420
YECKECRKSFSSGSALNRHQRIH
ENSVPAP00000011045
C2H2 ZF
426
448
YECNECDKAFGTGSSLTQHQRIH
ENSVPAP00000011045
C2H2 ZF
454
476
YECKGCGMAFGRVSEVQQHKKRH
Links
Other
C2H2 ZF
family TFs
Other
Vicugna pacos
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GD20208
Drosophila simulans
FBgn0191686
N