sna (Drosophila melanogaster)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0003448 T114408_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sna
M03670_2.00		 Drosophila melanogaster
TRCACCTGTYVB
VBRACAGGTGYA		 SELEX
Nitta et al.(2015)
sna_1		 (Direct) (Direct)
sna
M05862_2.00		 Drosophila melanogaster
NNVCACCTGTYNN
NNRACAGGTGBNN		 SMiLE-seq
Isakova et al.(2017)
Sna		 (Direct) (Direct)
sna
M06069_2.00		 Drosophila melanogaster
SMACYTGYBN
NVRCARGTKS		 B1H
Zhu et al.(2011)
sna_FlyReg_FBgn0003448		 (Direct) (Direct)
sna
M06070_2.00		 Drosophila melanogaster
SCACCTGWYV
BRWCAGGTGS		 B1H
Zhu et al.(2011)
sna_SANGER_10_FBgn0003448		 (Direct) (Direct)
sna
M06071_2.00		 Drosophila melanogaster
MCACCTGTYVHNNN
NNNDBRACAGGTGK		 B1H
Zhu et al.(2011)
sna_SOLEXA_5_FBgn0003448		 (Direct) (Direct)
sna
M09664_2.00		 Drosophila melanogaster
VMACCTGYB
VRCAGGTKB		 Misc
Kulakovskiy et al.(2009)
sna		 (Direct) (Direct)
sna
M10375_2.00		 Drosophila melanogaster
NKRCACCTGTYNB
VNRACAGGTGYMN		 Transfac
Matys et al.(2006)
I$SN_01		 (Direct) (Direct)
sna
M10376_2.00		 Drosophila melanogaster
WSBHADCAVSTKSK
MSMASBTGHTDVSW		 Transfac
Matys et al.(2006)
I$SN_02		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0080298 C2H2 ZF 245 267
FBpp0080298 C2H2 ZF 280 302
FBpp0080298 C2H2 ZF 306 328
FBpp0080298 C2H2 ZF 334 356
FBpp0080298 C2H2 ZF 362 383

Links

Other C2H2 ZF family TFs
Other Drosophila melanogaster TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
16375_YML007W Saccharomyces mikatae 16375_YML007W I
17363_Multiple Saccharomyces paradoxus 17363_Multiple I
17789_YML007W Saccharomyces bayanus 17789_YML007W I
AACERI_AaceriADR195C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADR195C I
AGOS_ADR195C Ashbya gossypii AGOS_ADR195C I
AWRI1499_0189 Brettanomyces bruxellensis AWRI1499_0189 I
CANTEDRAFT_114631 Candida tenuis CANTEDRAFT_114631 I
CaO19.1623 Candida albicans CaO19.1623 I
CaO19.9191 Candida albicans CaO19.9191 D
CD36_82190 Candida dubliniensis CD36_82190 I
CLUG_02670 Clavispora lusitaniae CLUG_02670 I
CLUG_02670 Candida lusitaniae CLUG_02670 I
CORT_0C04450 Candida orthopsilosis CORT_0C04450 I
CPAG_05080 Candida parapsilosis CPAG_05080 I
CTRG_02398 Candida tropicalis CTRG_02398 I
DEHA2G02420g Debaryomyces hansenii DEHA2G02420g I
Ecym_4064 Eremothecium cymbalariae Ecym_4064 I
estExt_fgenesh1_pg.C_chr_1.20096 Pichia stipitis estExt_fgenesh1_pg.C_chr_1.20096 I
G210_4543 Candida maltosa G210_4543 I
GNLVRS01_PISO0A09482g Millerozyma farinosa GNLVRS01_PISO0A09482g I
GNLVRS01_PISO0B09549g Millerozyma farinosa GNLVRS01_PISO0B09549g I
HPODL_04368 Ogataea parapolymorpha HPODL_04368 N
JL09_g922 Pichia kudriavzevii JL09_g922 N
KLTH0G03784g Lachancea thermotolerans KLTH0G03784g I
KLTH0G03784g Kluyveromyces thermotolerans KLTH0G03784g I
KUCA_T00000686001 Kuraishia capsulata KUCA_T00000686001 I
Kwal_18631 Kluyveromyces waltii Kwal_18631 I
LALA0_S17e00166g Lachancea lanzarotensis LALA0_S17e00166g I
LELG_02745 Lodderomyces elongisporus LELG_02745 I
PAS_chr4_0601 Komagataella pastoris PAS_chr4_0601 I
PGUG_00664 Meyerozyma guilliermondii PGUG_00664 I
PGUG_00664 Candida guilliermondii PGUG_00664 I
PICST_66589 Scheffersomyces stipitis PICST_66589 I
SAKL0G04950g Lachancea kluyveri SAKL0G04950g I
SKUD_204302 Saccharomyces kudriavzevii SKUD_204302 I
TDEL_0A03920 Torulaspora delbrueckii TDEL_0A03920 I
XP_002494040.1 Pichia pastoris XP_002494040.1 I
YAP1 Saccharomyces cerevisiae YML007W D
ZBAI_03740 Zygosaccharomyces bailii ZBAI_03740 I
ZBAI_09424 Zygosaccharomyces bailii ZBAI_09424 I
ZYRO0D12584g Zygosaccharomyces rouxii ZYRO0D12584g I