sob (Drosophila melanogaster)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0004892 T114421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sob
M03674_2.00		 Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1		 (Direct) (Direct)
sob
M03675_2.00		 Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2		 (Direct) (Direct)
sob
M06088_2.00		 Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892		 (Direct) (Direct)
sob
M06089_2.00		 Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.814 0.957
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.814 0.957
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.814 0.957
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.795 0.896
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.795 0.896
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.795 0.896
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.795 0.896
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0077247 C2H2 ZF 395 417
FBpp0077247 C2H2 ZF 423 445
FBpp0077247 C2H2 ZF 451 473
FBpp0077247 C2H2 ZF 479 501
FBpp0077247 C2H2 ZF 507 529

Links

Other C2H2 ZF family TFs
Other Drosophila melanogaster TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004730 Calypte anna Aan_R004730 N
Afo_R002166 Aptenodytes forsteri Afo_R002166 N
Alligator_sinensis_CCG012947.1 Alligator sinensis Alligator_sinensis_CCG012947.1 N
Brh_R013063 Buceros rhinoceros Brh_R013063 N
Cmyd_10018138 Chelonia mydas Cmyd_10018138 N
ENSACAG00000000987 Anolis carolinensis ENSACAG00000000987 N
ENSAMXG00000007536 Astyanax mexicanus ENSAMXG00000007536 N
ENSAPLG00000014933 Anas platyrhynchos ENSAPLG00000014933 N
npas2 Danio rerio ENSDARG00000016536 N
npas2 Gasterosteus aculeatus ENSGACG00000020338 N
ENSGALG00000009063 Gallus gallus ENSGALG00000009063 N
ENSGMOG00000012332 Gadus morhua ENSGMOG00000012332 N
ENSLACG00000016260 Latimeria chalumnae ENSLACG00000016260 N
ENSLOCG00000014750 Lepisosteus oculatus ENSLOCG00000014750 N
ENSMGAG00000008030 Meleagris gallopavo ENSMGAG00000008030 N
ENSOANG00000011640 Ornithorhynchus anatinus ENSOANG00000011640 N
ENSONIG00000004466 Oreochromis niloticus ENSONIG00000004466 N
ENSPFOG00000019432 Poecilia formosa ENSPFOG00000019432 N
ENSPSIG00000016231 Pelodiscus sinensis ENSPSIG00000016231 N
ENSTGUG00000004465 Taeniopygia guttata ENSTGUG00000004465 N
npas2 Tetraodon nigroviridis ENSTNIG00000011822 N
npas2 Takifugu rubripes ENSTRUG00000013269 N
ENSXMAG00000012189 Xiphophorus maculatus ENSXMAG00000012189 N
Gfo_R003435 Geospiza fortis Gfo_R003435 N
Ogr07495 Ophisaurus gracilis Ogr07495 N
Pvit_15200 Pogona vitticeps Pvit_15200 N
Tal_R013206 Tyto alba Tal_R013206 N
XP_002934591 Xenopus tropicalis XP_002934591 N