cbt (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0078183 T114730_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
cbt
M03705_2.00 		Drosophila melanogaster
DMCACRCCCMY
RKGGGYGTGKH		 SELEX
Nitta et al.(2015)
cbt_1 		0.804 0.957
cbt
M03706_2.00 		Drosophila melanogaster
RMCRCGCCCMCHH
DDGKGGGCGYGKY		 SELEX
Nitta et al.(2015)
cbt_2 		0.804 0.957
KLF15
M04511_2.00 		Homo sapiens
VHCMCVCCCMYN
NRKGGGBGKGDB		 SELEX
Yin et al.(2017)
KLF15_eDBD_HT-SELEX 		0.760 0.696
KLF15
M04513_2.00 		Homo sapiens
VMCMCDCCCMCH
DGKGGGHGKGKB		 SELEX
Yin et al.(2017)
KLF15_FL_HT-SELEX 		0.760 0.696
KLF15
M08323_2.00 		Homo sapiens
SSCYNBCYCCDCCYC
GRGGHGGRGVNRGSS		 ChIP-seq
Schmitges et al.(2016)
Q9UIH9.MEME 		0.760 0.696
KLF15
M08907_2.00 		Homo sapiens
CCNYYCCYNBCYCCKCCYY
RRGGMGGRGVNRGGRRNGG		 Misc
Kulakovskiy et al.(2013)
KLF15_HUMAN.H11MO.0.A 		0.760 0.696
Klf15
M08987_2.00 		Mus musculus
CCNYYCCYNBCYCCKCCYY
RRGGMGGRGVNRGGRRNGG		 Misc
Kulakovskiy et al.(2013)
KLF15_MOUSE.H11MO.0.A 		0.760 0.696
KLF15
M10241_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF15_Q2 		0.760 0.696
KLF15
M04512_2.00 		Homo sapiens
RCCMCGCCCMCH
DGKGGGCGKGGY		 SELEX
Yin et al.(2017)
KLF15_eDBD_Methyl-HT-SELEX 		0.760 0.696
KLF15
M04514_2.00 		Homo sapiens
GCCMCGCCCMCN
NGKGGGCGKGGC		 SELEX
Yin et al.(2017)
KLF15_FL_Methyl-HT-SELEX 		0.760 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0280374 C2H2 ZF 278 302
FBpp0280374 C2H2 ZF 308 332
FBpp0280374 C2H2 ZF 338 360

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG001574.1 Alligator sinensis Alligator_sinensis_CCG001574.1 I
CGI_10022808 Crassostrea gigas CGI_10022808 I
Cmyd_10001064 Chelonia mydas Cmyd_10001064 I
ATF5 Anolis carolinensis ENSACAG00000024934 I
ENSAMEG00000013562 Ailuropoda melanoleuca ENSAMEG00000013562 I
ENSAMXG00000002726 Astyanax mexicanus ENSAMXG00000002726 I
ENSAMXG00000003363 Astyanax mexicanus ENSAMXG00000003363 I
ATF5 Bos taurus ENSBTAG00000003457 I
ENSBTAP00000004485-D1 Bos grunniens ENSBTAP00000004485-D1 I
ATF5 Canis familiaris ENSCAFG00000029541 I
ATF5 Callithrix jacchus ENSCJAG00000004209 I
ENSCPOG00000021087 Cavia porcellus ENSCPOG00000021087 I
ENSCSAG00000002412 Chlorocebus sabaeus ENSCSAG00000002412 I
atf5a Danio rerio ENSDARG00000068096 I
atf5b Danio rerio ENSDARG00000077785 I
ATF5 Dasypus novemcinctus ENSDNOG00000047448 I
ENSDORG00000002803 Dipodomys ordii ENSDORG00000002803 I
ATF5 Equus caballus ENSECAG00000018168 I
ATF5 Felis catus ENSFCAG00000012175 I
ATF5 Homo sapiens ENSG00000169136 D
ENSGACG00000020416 Gasterosteus aculeatus ENSGACG00000020416 I
ENSGGOG00000010241 Gorilla gorilla ENSGGOG00000010241 I
ENSGGOG00000027048 Gorilla gorilla ENSGGOG00000027048 I
ENSGMOG00000005591 Gadus morhua ENSGMOG00000005591 I
ENSLACG00000008703 Latimeria chalumnae ENSLACG00000008703 I
ATF5 Loxodonta africana ENSLAFG00000010812 I
ENSLOCG00000003562 Lepisosteus oculatus ENSLOCG00000003562 I
ENSMEUG00000012685 Macropus eugenii ENSMEUG00000012685 I
ENSMICG00000003145 Microcebus murinus ENSMICG00000003145 I
ENSMMUG00000011630 Macaca mulatta ENSMMUG00000011630 I
ENSMMUP00000015263 Macaca fascicularis ENSMMUP00000015263 I
ENSMPUG00000002298 Mustela putorius furo ENSMPUG00000002298 I
Atf5 Mus musculus ENSMUSG00000038539 I
ENSNLEG00000005470 Nomascus leucogenys ENSNLEG00000005470 I
ENSONIG00000005408 Oreochromis niloticus ENSONIG00000005408 I
ENSONIG00000014771 Oreochromis niloticus ENSONIG00000014771 I
ATF5 Oryzias latipes ENSORLG00000007564 I
ENSORLG00000015241 Oryzias latipes ENSORLG00000015241 I
ENSPANG00000024418 Papio anubis ENSPANG00000024418 I
ATF5 Procavia capensis ENSPCAG00000010141 I
ENSPFOG00000004847 Poecilia formosa ENSPFOG00000004847 I
ENSPFOG00000009660 Poecilia formosa ENSPFOG00000009660 I
ENSPPYG00000015495 Pongo abelii ENSPPYG00000015495 I
ENSPSIG00000014590 Pelodiscus sinensis ENSPSIG00000014590 I
ATF5 Pan troglodytes ENSPTRG00000011327 I
ATF5 Pteropus vampyrus ENSPVAG00000016916 I
Atf5 Rattus norvegicus ENSRNOG00000020060 I
ATF5 Sus scrofa ENSSSCG00000003201 I
atf5a Tetraodon nigroviridis ENSTNIG00000011751 I
ENSTNIG00000014367 Tetraodon nigroviridis ENSTNIG00000014367 I
ENSTRUG00000011463 Takifugu rubripes ENSTRUG00000011463 I
atf5a Takifugu rubripes ENSTRUG00000016588 I
ATF5 Tursiops truncatus ENSTTRG00000001125 I
ENSXMAG00000012355 Xiphophorus maculatus ENSXMAG00000012355 I
ENSXMAG00000012359 Xiphophorus maculatus ENSXMAG00000012359 I
e_gw.394.39.1 Branchiostoma floridae e_gw.394.39.1 I
e_gw.5.489.1 Branchiostoma floridae e_gw.5.489.1 I
Myotis_brandtii_ATF5_10017676 Myotis brandtii Myotis_brandtii_ATF5_10017676 I
Ogr01256 Ophisaurus gracilis Ogr01256 I
Pvit_12444 Pogona vitticeps Pvit_12444 I
atf5 Xenopus tropicalis XB-GENE-5808898 I
atf5.2 Xenopus tropicalis XB-GENE-5902427 I
atf5.2.S Xenopus laevis XB-GENE-5902505 I