GI23984 (Drosophila mojavensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0146708 T115714_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens-2
M06165_2.00 		Drosophila melanogaster
RYAAATCWSDGCAYNC
GNRTGCHSWGATTTRY		 B1H
Zhu et al.(2011)
sens-2_SANGER_2.5_FBgn0051632 		0.825 0.986
GFI1B
M00240_2.00 		Homo sapiens
NNAAATCWSDN
NHSWGATTTNN		 PBM
Barrera et al.(2016)
GFI1B_REF 		0.782 0.833
GFI1B
M04523_2.00 		Homo sapiens
NMAATCASDGCNNBBCACTNN
NNAGTGVVNNGCHSTGATTKN		 SELEX
Yin et al.(2017)
GFI1B_eDBD_HT-SELEX 		0.782 0.833
Gfi1b
M08098_2.00 		Mus musculus
MAATCWCWGCH
DGCWGWGATTK		 ChIP-seq
Mathelier et al.(2014)
MA0483.1 		0.782 0.833
GFI1B
M08909_2.00 		Homo sapiens
MAATCWSDGY
RCHSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1B_HUMAN.H11MO.0.A 		0.782 0.833
Gfi1b
M08977_2.00 		Mus musculus
MAAYCACWGH
DCWGWGRTTK		 Misc
Kulakovskiy et al.(2013)
GFI1B_MOUSE.H11MO.0.A 		0.782 0.833
Gfi1b
M09514_2.00 		Mus musculus
MAATCWSWGC
GCWSWGATTK		 Misc
Heinz et al.(2010)
HPC7-Gfi1b_GSE22178 		0.782 0.833
GFI1B
M10243_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1B_01 		0.782 0.833
GFI1B
M10244_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1B_Q6 		0.782 0.833
GFI1B
M00239_2.00 		Homo sapiens
NNAAATCWSDN
NHSWGATTTNN		 PBM
Barrera et al.(2016)
GFI1B_A204T 		0.782 0.833
GFI1B
M04524_2.00 		Homo sapiens
NMAATCASWGCDNNBCACTHN
NDAGTGVNNHGCWSTGATTKN		 SELEX
Yin et al.(2017)
GFI1B_eDBD_Methyl-HT-SELEX 		0.782 0.833
GFI1
M00238_2.00 		Homo sapiens
NWAWMNNNN
NNNNKWTWN		 PBM
Barrera et al.(2016)
GFI1_REF 		0.774 0.848
GFI1
M04507_2.00 		Homo sapiens
BMAATCACDGCNHBBCACTMN
NKAGTGVVDNGCHGTGATTKV		 SELEX
Yin et al.(2017)
GFI1_eDBD_HT-SELEX 		0.774 0.848
Gfi1
M02668_2.00 		Rattus norvegicus
NMAATCWVHS
SDBWGATTKN		 SELEX
Mathelier et al.(2014)
MA0038.1 		0.774 0.848
GFI1
M08905_2.00 		Homo sapiens
MAATCWSWGY
RCWSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1_HUMAN.H11MO.0.C 		0.774 0.848
Gfi1
M08984_2.00 		Mus musculus
MAATCWSWGY
RCWSWGATTK		 Misc
Kulakovskiy et al.(2013)
GFI1_MOUSE.H11MO.0.C 		0.774 0.848
GFI1
M10235_2.00 		Homo sapiens
NNNNNNNRCHSWGATTTDNNBNNN
NNNVNNHAAATCWSDGYNNNNNNN		 Transfac
Matys et al.(2006)
V$GFI1_01 		0.774 0.848
GFI1
M10236_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GFI1_Q6_01 		0.774 0.848
GFI1
M04508_2.00 		Homo sapiens
NNAGTGVVNHGCWSTGATTKV
BMAATCASWGCDNBBCACTNN		 SELEX
Yin et al.(2017)
GFI1_eDBD_Methyl-HT-SELEX 		0.774 0.848
GFI1
M00236_2.00 		Homo sapiens
NAATMNNNN
NNNNKATTN		 PBM
Barrera et al.(2016)
GFI1_L400F 		0.772 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0173201 C2H2 ZF 518 542
FBpp0173201 C2H2 ZF 547 569
FBpp0173201 C2H2 ZF 575 597
FBpp0173201 C2H2 ZF 603 625
FBpp0173201 C2H2 ZF 631 653
FBpp0173201 C2H2 ZF 659 682

Links

Other C2H2 ZF family TFs
Other Drosophila mojavensis TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA026683 Oryza indica BGIOSGA026683 N
BRADI3G40280 Brachypodium distachyon BRADI3G40280 N
F775_32365 Aegilops tauschii F775_32365 N
GRMZM2G113181 Zea mays GRMZM2G113181 N
LPERR08G17220 Leersia perrieri LPERR08G17220 N
MLOC_53939 Hordeum vulgare MLOC_53939 N
OB08G27280 Oryza brachyantha OB08G27280 N
OBART08G20380 Oryza barthii OBART08G20380 N
OGLUM08G21650 Oryza glumaepatula OGLUM08G21650 N
OLONG_027098 Oryza longistaminata OLONG_027098 N
OMERI02G02200 Oryza meridionalis OMERI02G02200 N
OPUNC08G18550 Oryza punctata OPUNC08G18550 N
ORGLA08G0180600 Oryza glaberrima ORGLA08G0180600 N
ORUFI08G22870 Oryza rufipogon ORUFI08G22870 N
OS08G0515800 Oryza sativa OS08G0515800 N
Pavir.Fa00462 Panicum virgatum Pavir.Fa00462 N
Pavir.Fb01913 Panicum virgatum Pavir.Fb01913 N
Sb07g027350 Sorghum bicolor Sb07g027350 N
Si001226m.g Setaria italica Si001226m.g N
Si014054m.g Setaria italica Si014054m.g N
Traes_7AS_3BAA88E9E Triticum aestivum Traes_7AS_3BAA88E9E N
Traes_7DS_64B00DC40 Triticum aestivum Traes_7DS_64B00DC40 N
TRIUR3_01970 Triticum urartu TRIUR3_01970 N