GM14024 (Drosophila sechellia)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0168953 T116026_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.827 1.000
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.827 1.000
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.827 1.000
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.786 0.912
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.786 0.912
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.786 0.912
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.786 0.912
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.767 0.807
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.767 0.807
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.767 0.807
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.767 0.807
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.758 0.789
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.758 0.789
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.758 0.789
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0195501 C2H2 ZF 439 461
FBpp0195501 C2H2 ZF 470 492
FBpp0195501 C2H2 ZF 496 518
FBpp0195501 C2H2 ZF 524 546
FBpp0195501 C2H2 ZF 552 573

Links

Other C2H2 ZF family TFs
Other Drosophila sechellia TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_038710 Albugo laibachii ALNC14_038710 N 0.000
ALNC14_045170 Albugo laibachii ALNC14_045170 N 0.000
estExt_Genewise1.C_70435 Phytophthora capsici estExt_Genewise1.C_70435 N 0.000
F443_08670 Phytophthora parasitica F443_08670 N 0.000
fgenesh_scip_prom.28083.5589 Phytophthora lateralis fgenesh_scip_prom.28083.5589 N 0.000
fgenesh_scip_prom.46568.4406 Phytophthora kernoviae fgenesh_scip_prom.46568.4406 N 0.000
HpaG811065 Hyaloperonospora arabidopsidis HpaG811065 N 0.000
maker-pag1_scaffold_818-snap-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_818-snap-gene-0.3 N 0.000
maker-pir_contig_67-snap-gene-0.23 Pythium irregulare maker-pir_contig_67-snap-gene-0.23 N 0.000
Phyra86538 Phytophthora ramorum Phyra86538 N 0.000
Physo140839 Phytophthora sojae Physo140839 N 0.000
PITG_06748 Phytophthora infestans PITG_06748 N 0.000
PYU1_G010470 Pythium ultimum PYU1_G010470 N 0.000
SPRG_00677 Saprolegnia parasitica SPRG_00677 N 0.000