CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GE25586
(
Drosophila yakuba
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0242649
T117105_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sqz
M06109_2.00
Drosophila melanogaster
KTTTTTTTBDTDNDBB
VVHNHAHVAAAAAAAM
B1H
Zhu et al.(2011)
sqz_SANGER_5_FBgn0010768
0.827
1.000
sqz
M06110_2.00
Drosophila melanogaster
NNNKTTTTTTDBNBN
NVNVHAAAAAAMNNN
B1H
Zhu et al.(2011)
sqz_SOLEXA_5_FBgn0010768
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0270596
C2H2 ZF
158
180
YKCGSCSKSFANSSYLSQHTRIH
FBpp0270596
C2H2 ZF
186
208
YRCEICQRKFTQLSHLQQHIRTH
FBpp0270596
C2H2 ZF
214
238
YKCRHAGCPKAFSQLSNLQSHSRCH
FBpp0270596
C2H2 ZF
244
266
FKCNSCYKCFSDEMTLLEHIPKH
FBpp0270596
C2H2 ZF
275
297
HICNLCGKSYTQETYLQKHLQKH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila yakuba
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA18619
Drosophila pseudoobscura
FBgn0078620
N
GH17011
Drosophila grimshawi
FBgn0124482
N
GI11905
Drosophila mojavensis
FBgn0134663
N
GL12770
Drosophila persimilis
FBgn0150376
N
GK12335
Drosophila willistoni
FBgn0214345
N