GA28112 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0249475 T117200_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.825 0.989
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.825 0.989
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.825 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0285853 C2H2 ZF 76 98
FBpp0285853 C2H2 ZF 104 126
FBpp0285853 C2H2 ZF 144 166
FBpp0285853 C2H2 ZF 172 195

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_239429 Agaricus bisporus AGABI2DRAFT_239429 N
BN946_scf184920.g52 Trametes cinnabarina BN946_scf184920.g52 I
BOTBODRAFT_93074 Botryobasidium botryosum BOTBODRAFT_93074 N
CC1G_08635 Coprinopsis cinerea CC1G_08635 N
CERSUDRAFT_109986 Ceriporiopsis subvermispora CERSUDRAFT_109986 N
CY34DRAFT_809202 Suillus luteus CY34DRAFT_809202 N
DACRYDRAFT_24120 Dacryopinax sp DACRYDRAFT_24120 I
DICSQDRAFT_66188 Dichomitus squalens DICSQDRAFT_66188 I
fgenesh1_pg.C_scaffold_14000237 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_14000237 N
FIBRA_01656 Fibroporia radiculosa FIBRA_01656 I
FOMPIDRAFT_1017957 Fomitopsis pinicola FOMPIDRAFT_1017957 N
GALMADRAFT_217801 Galerina marginata GALMADRAFT_217801 N
GLOTRDRAFT_69493 Gloeophyllum trabeum GLOTRDRAFT_69493 I
GSTUM_00002563001 Tuber melanosporum GSTUM_00002563001 I
gw1.1.2337.1 Heterobasidion annosum gw1.1.2337.1 N
HETIRDRAFT_443323 Heterobasidion irregulare HETIRDRAFT_443323 N
HYDPIDRAFT_161884 Hydnomerulius pinastri HYDPIDRAFT_161884 N
JAAARDRAFT_60403 Jaapia argillacea JAAARDRAFT_60403 N
K443DRAFT_677716 Laccaria amethystina K443DRAFT_677716 N
LACBIDRAFT_242593 Laccaria bicolor LACBIDRAFT_242593 N
M378DRAFT_66555 Amanita muscaria M378DRAFT_66555 N
M404DRAFT_43642 Pisolithus tinctorius M404DRAFT_43642 N
M407DRAFT_78353 Tulasnella calospora M407DRAFT_78353 N
M408DRAFT_34303 Serendipita vermifera M408DRAFT_34303 N
M413DRAFT_232462 Hebeloma cylindrosporum M413DRAFT_232462 N
Moror_376 Moniliophthora roreri Moror_376 I
MPER_01714 Moniliophthora perniciosa MPER_01714 I
MVLG_00287 Microbotryum violaceum MVLG_00287 N
PAXRUDRAFT_30646 Paxillus rubicundulus PAXRUDRAFT_30646 N
PHACADRAFT_246479 Phanerochaete carnosa PHACADRAFT_246479 N
PHLGIDRAFT_129508 Phlebiopsis gigantea PHLGIDRAFT_129508 N
PIIN_04121 Piriformospora indica PIIN_04121 N
PILCRDRAFT_818339 Piloderma croceum PILCRDRAFT_818339 N
PISMIDRAFT_69441 Pisolithus microcarpus PISMIDRAFT_69441 N
PISMIDRAFT_70573 Pisolithus microcarpus PISMIDRAFT_70573 N
PLEOSDRAFT_1111247 Pleurotus ostreatus PLEOSDRAFT_1111247 N
POSPLDRAFT_93814 Postia placenta POSPLDRAFT_93814 I
RO3G_00882 Rhizopus oryzae RO3G_00882 I
SCHCODRAFT_79748 Schizophyllum commune SCHCODRAFT_79748 N
SCLCIDRAFT_18203 Scleroderma citrinum SCLCIDRAFT_18203 N
SERLA73DRAFT_78019 Serpula lacrymans SERLA73DRAFT_78019 N
V565_015180 Rhizoctonia solani V565_015180 N
W97_06787 Coniosporium apollinis W97_06787 I