CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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FIBRA_04875
(
Fibroporia radiculosa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FIBRA_04875
T117498_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_258883
M01464_2.00
Schizophyllum commune
NNCCCCTDD
HHAGGGGNN
PBM
Najafabadi et al.(2015a)
pTH10244
0.762
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCM02767
C2H2 ZF
585
610
YMCQVPHCGKCFARGEHLKRHVRSIH
CCM02767
C2H2 ZF
616
638
HRCPVCEKDFSRHDNLGQHMRVH
Links
Other
C2H2 ZF
family TFs
Other
Fibroporia radiculosa
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_189243
Agaricus bisporus
AGABI2DRAFT_189243
I
0.786
BN946_scf184576.g4
Trametes cinnabarina
BN946_scf184576.g4
I
0.786
CC1G_13761
Coprinopsis cinerea
CC1G_13761
I
0.762
CERSUDRAFT_79927
Ceriporiopsis subvermispora
CERSUDRAFT_79927
I
0.786
CY34DRAFT_41572
Suillus luteus
CY34DRAFT_41572
I
0.776
fgenesh2_pg.C_scaffold_1000086
Heterobasidion annosum
fgenesh2_pg.C_scaffold_1000086
I
0.762
FOMPIDRAFT_1133812
Fomitopsis pinicola
FOMPIDRAFT_1133812
I
0.786
GLOTRDRAFT_30797
Gloeophyllum trabeum
GLOTRDRAFT_30797
I
0.762
JAAARDRAFT_112445
Jaapia argillacea
JAAARDRAFT_112445
I
0.810
K443DRAFT_132577
Laccaria amethystina
K443DRAFT_132577
I
0.762
LACBIDRAFT_301563
Laccaria bicolor
LACBIDRAFT_301563
I
0.762
M378DRAFT_213370
Amanita muscaria
M378DRAFT_213370
I
0.762
M404DRAFT_57116
Pisolithus tinctorius
M404DRAFT_57116
I
0.776
PISMIDRAFT_58693
Pisolithus microcarpus
PISMIDRAFT_58693
I
0.776
POSPLDRAFT_106184
Postia placenta
POSPLDRAFT_106184
I
0.762
SCHCODRAFT_258883
Schizophyllum commune
SCHCODRAFT_258883
D
0.762
SCLCIDRAFT_1207253
Scleroderma citrinum
SCLCIDRAFT_1207253
I
0.776
SERLA73DRAFT_115823
Serpula lacrymans
SERLA73DRAFT_115823
I
0.767