GRMZM2G048154 (Zea mays)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GRMZM2G048154 T118566_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.786 0.795
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.786 0.795
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.776 0.773
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.772 0.818
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.772 0.818
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.771 0.773
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.763 0.818
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G048154_P01 C2H2 ZF 50 72
GRMZM2G048154_P01 C2H2 ZF 96 116

Links

Other C2H2 ZF family TFs
Other Zea mays TFs

372 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_kg.C_150123 Phytophthora capsici estExt_fgenesh1_kg.C_150123 N
F443_02900 Phytophthora parasitica F443_02900 N
fgenesh_scip_prom.28083.10139 Phytophthora lateralis fgenesh_scip_prom.28083.10139 N
fgenesh_scip_prom.46568.10438 Phytophthora kernoviae fgenesh_scip_prom.46568.10438 N
HpaG804023 Hyaloperonospora arabidopsidis HpaG804023 N
maker-pve_contig_338-snap-gene-0.20 Pythium vexans maker-pve_contig_338-snap-gene-0.20 N
Phyra83470 Phytophthora ramorum Phyra83470 N
Physo133830 Phytophthora sojae Physo133830 N
PITG_04377 Phytophthora infestans PITG_04377 N