GSMUA_Achr4G12160_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr4G12160_001 T118701_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.762 0.800
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.762 0.778
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.761 0.778
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P12160_001 C2H2 ZF 84 106
GSMUA_Achr4P12160_001 C2H2 ZF 113 134

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CADANGAG00001480 Aspergillus niger CADANGAG00001480 I
ANIA_01678 Aspergillus nidulans CADANIAG00008319 D
EURHEDRAFT_451742 Aspergillus ruber EURHEDRAFT_451742 I
fgenesh1_pg.sca_15_chr12_5_0000334 Nectria haematococca fgenesh1_pg.sca_15_chr12_5_0000334 N
fgenesh1_pm.00042_#_4 Aspergillus carbonarius fgenesh1_pm.00042_#_4 I
fgenesh1_pm.00042_#_402 Aspergillus carbonarius fgenesh1_pm.00042_#_402 I
M437DRAFT_43892 Aureobasidium melanogenum M437DRAFT_43892 I
MPH_12384 Macrophomina phaseolina MPH_12384 I
NechaG87897 Fusarium solani NechaG87897 N
Pc21g22670 Penicillium chrysogenum Pc21g22670 I
PCH_Pc21g22670 Penicillium rubens PCH_Pc21g22670 I
PFICI_09828 Pestalotiopsis fici PFICI_09828 I
S40288_09024 Stachybotrys chartarum S40288_09024 N
U727_00430520201 Penicillium solitum U727_00430520201 I
UCRNP2_4422 Neofusicoccum parvum UCRNP2_4422 I